I would like to be able to change the correlation threshold variable in 
align_image_stack but am no C++ programmer!  

I have tried to compile the source (on windows) without success (any 
hints), I have looked at 
http://sourceforge.net/apps/mediawiki/qtpfsgui/index.php?title=Align_image_stack
.

Has anyone else tried this before? Or do you know of a version where the 
correlation threshold is a switch on the command line?

Many thanks, Phil

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