Hi Joel, Hmm, I'm not sure what's going on for you. It definitely works for me:
mbook:~$ . ~/Desktop/iXAFS.app/Contents/Resources/local/bin/iff_init.sh mbook:~$ python Python 2.6.5 (r265:79359, Mar 24 2010, 01:32:55) [GCC 4.0.1 (Apple Inc. build 5493)] on darwin Type "help", "copyright", "credits" or "license" for more information. >>> import Ifeffit >>> i = Ifeffit.Ifeffit() >>> i.ifeffit("show $&build") $&build = 1.2.12 Copyright (c) 2005 Matt Newville, Univ of Chicago 0 If I had to guess, I'd look at what DYLD_LIBRARY_PATH is set to. That should definitely include the folder that contains libifeffit.dylib, eg /Applications/iXAFS.app/Contents/Resources/local/lib Have you tried to run this from the iXAFS shell from the iXAFS app? That should definitely set the environment correctly. Sorry for the trouble, --Matt On Thu, Sep 23, 2010 at 1:51 AM, Brugger, Joel (SAM) <joel.brug...@samuseum.sa.gov.au> wrote: > Hi Brandon, > > Did you actually test the python module (i.e. Use python scripting to > control arthemis?) > > On 10.6.4, I’ve obtain the following error: > > bash-3.2$ python > Python 2.6.1 (r261:67515, Dec 17 2009, 00:59:15) > [GCC 4.2.1 (Apple Inc. build 5646)] on darwin > Type "help", "copyright", "credits" or "license" for more information. >>>> import math >>>> import Ifeffit >>>> iff = Ifeffit.Ifeffit() > failed to load ifeffit library libifeffit.dylib > /usr/local/share/ifeffit/:/opt/intel/Compiler/11.1/089/bin/intel64:/opt/local/bin:/opt/local/sbin:/Volumes/iXAFS3.0/iXAFS.app/Contents/Resources/local/bin:/opt/intel/Compiler/11.1/089/bin/intel64:/opt/local/bin:/opt/local/sbin:/opt/local/bin:/opt/local/sbin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/X11/bin:/usr/local/lib:/Users/joelb/Desktop/FitYK/:/usr/local/lib/:/sw/lib/:/sw/include/readline/:/unix/Molecular > Dynamics/moldy-2.16e:/Users/joelb/Public/XDS/XDS-OSX_Intel:/Users/joelb/Desktop/fdmnes:/Applications/iXAFS.app/Contents/Resources/local/bin:/Users/joelb/Desktop/Molecular > Dynamics/nwchem-5.1-MACX-Darwin-gfortran-i386/bin/:/usr/local/lib:/Users/joelb/Desktop/FitYK/:/usr/local/lib/:/sw/lib/:/sw/include/readline/:/unix/Molecular > Dynamics/moldy-2.16e:/Users/joelb/Public/XDS/XDS-OSX_Intel:/Users/joelb/Desktop/fdmnes:/Users/joelb/Desktop/Molecular > Dynamics/nwchem-5.1-MACX-Darwin-gfortran-i386/bin/:/Applications/iXAFS.app/Contents/Resources/local/lib:/Applications/iXAFS.app/Contents/Resources/local/bin > Traceback (most recent call last): > File "<stdin>", line 1, in <module> > File "/Library/Python/2.6/site-packages/Ifeffit/Ifeffit.py", line 80, in > __init__ > raise ImportError('Cannot load ifeffit library') > ImportError: Cannot load ifeffit library > > > > . /Applications/iXAFS.app/Contents/Resources/local/bin/iff_init.sh is in my > .profile and is loaded. Indeed, invoking libifeffit.dylib from the command > line ‘works’: > > bash-3.2$ libifeffit.dylib > bash: /Applications/iXAFS.app/Contents/Resources/local/lib/libifeffit.dylib: > cannot execute binary file > > bash-3.2$ ls -l libifeffit.dylib > -rwxr-xr-x 1 joelb admin 1500676 12 Sep 00:07 libifeffit.dylib > > So close! > > Godd news last: we did not try python scripting on another machine, but > IFEFFIT appears to run perfectly on 10.5 now – thanks Matt (champagne cork > noise). > > Joel & Barbara > _______________________________________________ > Ifeffit mailing list > Ifeffit@millenia.cars.aps.anl.gov > http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit > > _______________________________________________ Ifeffit mailing list Ifeffit@millenia.cars.aps.anl.gov http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit