Frank, Looks like I have two versions of demeter-devel installed
sudo port -f activate demeter-devel Password: ---> The following versions of demeter-devel are currently installed: ---> demeter-devel @0.9.20-2014-06-06_0 ---> demeter-devel @0.9.20pre10_0 Error: port activate failed: Registry error: Please specify the full version as recorded in the port registry. How do I specify a the full version? Thanks Jennifer ᐧ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Jennifer L.W. Carter Assistant Professor Department of Materials Science and Engineering Case Western Reserve University *500B White Building* *10900 Euclid Ave.Cleveland, OH 44106-4901phone: (216) 368-4214email: jennifer.w.car...@case.edu <jennifer.w.car...@case.edu>* On Mon, Jul 14, 2014 at 3:00 PM, Schima, Frank <frank.sch...@nist.gov> wrote: > Your setup got munged somehow. You need to do what it says. Namely: > > sudo port -f activate demeter-devel > > > -Frank > > On Jul 14, 2014, at 3:55 PM, Jennifer Carter <jwc...@case.edu> wrote: > > when I run > > *sudo port activate demeter-devel @0.9.20pre10_0* > ---> Computing dependencies for demeter-devel > ---> Activating demeter-devel @0.9.20pre10_0 > Error: org.macports.activate for port demeter-devel returned: Image error: > /opt/local/lib/perl5/site_perl/5.16.3/darwin-thread-multi-2level/Demeter/Plugins/SpecFileLongLine.pm > already exists and does not belong to a registered port. Unable to > activate port demeter-devel. Use 'port -f activate demeter-devel' to force > the activation. > Please see the log file for port demeter-devel for details: > > /opt/local/var/macports/logs/_opt_local_var_macports_registry_portfiles_demeter-devel-0.9.20pre10_0_54f3f2fd9281aa66df973ff2918ccf4354f1f896e5b2bc57d680266a42be52f1-5435/demeter-devel/main.log > Warning: Failed to execute portfile from registry for demeter-devel > @0.9.20pre10_0 > ---> Activating demeter-devel @0.9.20pre10_0 > Error: port activate failed: Image error: > /opt/local/lib/perl5/site_perl/5.16.3/darwin-thread-multi-2level/Demeter/Plugins/SpecFileLongLine.pm > already exists and does not belong to a registered port. Unable to > activate port demeter-devel. Use 'port -f activate demeter-devel' to force > the activation. > ᐧ > > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > Jennifer L.W. Carter > > Assistant Professor > Department of Materials Science and Engineering > Case Western Reserve University > > *500B White Building* > > > > *10900 Euclid Ave. Cleveland, OH 44106-4901 phone: (216) 368-4214 > email: jennifer.w.car...@case.edu <jennifer.w.car...@case.edu>* > > > On Mon, Jul 14, 2014 at 2:46 PM, Schima, Frank <frank.sch...@nist.gov> > wrote: > >> For whatever reason, you do not have any version of demeter-devel active. >> You must activate the latest version as follows: >> >> sudo port activate demeter-devel @0.9.20pre10_0 >> >> >> -Frank >> >> On Jul 14, 2014, at 3:43 PM, Jennifer Carter <jwc...@case.edu> wrote: >> >> Frank, >> >> This is what I get for the following terminal inputs: >> >> *169-231-92-234:~ jwc137$ port installed ifeffit p5.16-ifeffit >> demeter-devel* >> The following ports are currently installed: >> demeter-devel @0.9.20pre10_0 >> demeter-devel @0.9.20-2014-06-06_0 >> ifeffit @1.2.11c_0+gcc48 >> ifeffit @1.2.13_0+gcc48 (active) >> p5.16-ifeffit @1.0.0_0 >> p5.16-ifeffit @2_0 (active) >> *169-231-92-234:~ jwc137$ ls -l /opt/local/bin/athena* >> ls: /opt/local/bin/athena: No such file or directory >> *169-231-92-234:~ jwc137$ ls -l /opt/local/bin/atoms* >> ls: /opt/local/bin/atoms: No such file or directory >> 169-231-92-234:~ jwc137$ >> ᐧ >> >> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >> Jennifer L.W. Carter >> >> Assistant Professor >> Department of Materials Science and Engineering >> Case Western Reserve University >> >> *500B White Building* >> >> >> >> *10900 Euclid Ave. Cleveland, OH 44106-4901 phone: (216) 368-4214 >> email: jennifer.w.car...@case.edu <jennifer.w.car...@case.edu>* >> >> >> On Mon, Jul 14, 2014 at 2:00 PM, Schima, Frank <frank.sch...@nist.gov> >> wrote: >> >>> Jennifer, >>> >>> >>> There is nothing else to do. >>> >>> What is the output of the following 3 commands? >>> >>> port installed ifeffit p5.16-ifeffit demeter-devel >>> ls -l /opt/local/bin/athena >>> ls -l /opt/local/bin/atoms >>> >>> Here is the my output (on 2 different computers): >>> >>> $ port installed ifeffit p5.16-ifeffit demeter-devel >>> The following ports are currently installed: >>> demeter-devel @0.9.20pre10_0 (active) >>> ifeffit @1.2.13_0+gcc48 (active) >>> p5.16-ifeffit @2_0 (active) >>> >>> $ ls -l /opt/local/bin/athena >>> lrwxr-xr-x 1 root admin 43 Jul 14 10:53 /opt/local/bin/athena -> >>> /opt/local/libexec/perl5.16/sitebin/dathena >>> >>> $ ls -l /opt/local/bin/atoms >>> lrwxr-xr-x 1 root admin 45 Jul 14 10:53 /opt/local/bin/atoms -> >>> /opt/local/libexec/perl5.16/sitebin/atoms-gui >>> >>> As for that perl command, make sure you are using Macports perl. >>> >>> $ which perl >>> /opt/local/bin/perl >>> >>> >>> -Frank >>> >>> On Jul 14, 2014, at 2:47 PM, Jennifer Carter <jwc...@case.edu> wrote: >>> >>> Frank, >>> >>> I followed the instructions for updating a current version, but now >>> when I type "athena" or "atoms" in the terminal I get the message "command >>> not found" am I missing a step? >>> >>> running perl -e 'use Demeter; print $INC{"Demeter.pm"}, $/' >>> >>> indicates that nothing was installed. >>> >>> Thanks >>> Jennifer >>> ᐧ >>> >>> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >>> Jennifer L.W. Carter >>> >>> Assistant Professor >>> Department of Materials Science and Engineering >>> Case Western Reserve University >>> >>> *500B White Building* >>> >>> >>> >>> *10900 Euclid Ave. Cleveland, OH 44106-4901 phone: (216) 368-4214 >>> email: jennifer.w.car...@case.edu <jennifer.w.car...@case.edu>* >>> >>> >>> On Mon, Jul 14, 2014 at 1:04 PM, Schima, Frank <frank.sch...@nist.gov> >>> wrote: >>> >>>> Mac OS X users, >>>> >>>> >>>> Thanks to help from Bruce Ravel and Matt Newville, I have updated >>>> ifeffit and Demeter-devel in Macports to fix a number of problems reported. >>>> >>>> To update from your current version type the following: >>>> >>>> sudo port selfupdate >>>> sudo port upgrade outdated >>>> >>>> To install from scratch after installing Macports [1]: >>>> >>>> sudo port selfupdate >>>> sudo port install demeter-devel >>>> >>>> When done, your should see the following ports installed: >>>> >>>> $ port installed ifeffit p5.16-ifeffit demeter-devel >>>> The following ports are currently installed: >>>> demeter-devel @0.9.20pre10_0 (active) >>>> ifeffit @1.2.13_0+gcc48 (active) >>>> p5.16-ifeffit @2_0 (active) >>>> >>>> Please reply to the list (NOT to me directly) about how this works >>>> for you. >>>> >>>> >>>> Cheers! >>>> Frank >>>> >>>> [1] <https://www.macports.org/install.php> >>>> >>>> _______________________________________________ >>>> Ifeffit mailing list >>>> Ifeffit@millenia.cars.aps.anl.gov >>>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit >>>> >>>> >>> _______________________________________________ >>> Ifeffit mailing list >>> Ifeffit@millenia.cars.aps.anl.gov >>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit >>> >>> >>> >>> _______________________________________________ >>> Ifeffit mailing list >>> Ifeffit@millenia.cars.aps.anl.gov >>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit >>> >>> >> _______________________________________________ >> Ifeffit mailing list >> Ifeffit@millenia.cars.aps.anl.gov >> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit >> >> >> >> _______________________________________________ >> Ifeffit mailing list >> Ifeffit@millenia.cars.aps.anl.gov >> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit >> >> > _______________________________________________ > Ifeffit mailing list > Ifeffit@millenia.cars.aps.anl.gov > http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit > > > > _______________________________________________ > Ifeffit mailing list > Ifeffit@millenia.cars.aps.anl.gov > http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit > >
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