On Thu, Aug 1, 2013 at 11:26 PM, 四正(红砖) <[email protected]> wrote:

>
> for an edgelist file, we can use read.graph(in R) to load the graph, it
> seems fast, and the node id in edgelist file will be used as real node id.
>
> however, if i add the vertices by reading the edgelist file myself, the
> node ids in the file will be only used as the names of the vertices.
>

It would be nice to have some complete example (=code), to see what exactly
you did. read.graph() can read various formats, and sometimes vertex names
are created, sometimes not. I guess you used format="edgelist", so no
vertex names were added.

if i add the two types of vertices in advance, how can i add the edges
> between them according to the edgelist file? it seems that add.edges can
> only add edges by names of the node?
>

You can add edges based on numeric vertex ids as well. The type of the
vertex has not much to do with the name of the vertex, so I still don't get
the problem.

Gabor

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