Hi,
I am using igraph in R, and need a clarification about the rewire()
function. The parameter niter is the number of times the algorithm will
choose two arbitrary edges and shuffle them? So niter=10 would randomly
shuffle only 10 pairs of edges?
I am working with a graph of ~150K edges - if my understanding of niter
is correct, how many iterations would be recommended to obtain a
reasonably rewired graph? I guess 150K iterations would take a while to
compute.
My current problem is to compute the probability of observing each
particular edge in a random graph with the same degree sequence.
I was thinking of estimating this probability by the percentage of
simulations in which an edge was observed.
Your suggestions would be really appreciated.
Thanks,
Sal
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