Hi,
On Thu, Apr 17, 2014 at 7:42 AM, Diego Diez <[email protected]> wrote: > Hi all, > > Since R-3.1.0 the OSX binaries come in two flavors, snow leopard and > mavericks. Actually, both can be used in mavericks and because > currently the Bioconductor project does not support Maverick's > binaries I have the snow leopard installed. However, when trying to > install igraph I get version 0.6.5-2, and version 0.7 is only > available as source (see below code). > I am not sure why this happens, but you can go to the CRAN site, download the 0.7.0 file by hand and install it by hand. I have just tried this, it seems to work. > Eventually Bioconductor will provide Mavericks binaries and the > problem will be fixed by installing the mavericks flavor. However > there might be some bona fide snow leopard users and since my package > depends on igraph 0.7 this can cause confusion as they will have to > install developer tools to get it. Is the reason for this problem > known by the igraph developers? I did not know about this, actually, and I have no idea about the reason. > Is there a fix scheduled? We cannot fix this, the binaries are built by CRAN. > Should I ask > instead in the R mailing list? > Yes, maybe on R-devel. Thanks for the report! Best, Gabor > Thank you. > All the best, > Diego > > > install.packages("igraph") > > There is a binary version available (and will be installed) > but the source version is later: > binary source > igraph 0.6.5-2 0.7.0 > > trying URL ' > http://cran.rstudio.com/bin/macosx/contrib/3.1/igraph_0.6.5-2.tgz' > Content type 'application/x-gzip' length 4466270 bytes (4.3 Mb) > opened URL > ================================================== > downloaded 4.3 Mb > > > The downloaded binary packages are in > > /var/folders/kx/xm4xdp6x3dl2sklv_xqyvxnm0000gn/T//RtmpcaMjZw/downloaded_packages > > sessionInfo() > R version 3.1.0 (2014-04-10) > Platform: x86_64-apple-darwin10.8.0 (64-bit) > > locale: > [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 > > attached base packages: > [1] stats graphics grDevices utils datasets methods > [7] base > > loaded via a namespace (and not attached): > [1] tools_3.1.0 > > > > -- > Diego Diez, PhD > Assistant Professor > Quantitative Immunology Research Unit, > WPI Immunology Frontier Research Center (IFReC) > 8F Integrated Life Science Building, Osaka University, > 3-1 Yamada-oka, Suita, Osaka 565-0871, Japan > Phone: +81-6-6879-4269 > [email protected] > > _______________________________________________ > igraph-help mailing list > [email protected] > https://lists.nongnu.org/mailman/listinfo/igraph-help >
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