Thanks. Is there a function, by which I can rewire two selected edges? Best Quanwei
On 9/3/15 3:38 PM, "Tamas Nepusz" <[email protected]> wrote: >Hi, > >There is no built-in function for this in igraph; you'll have to >implement the rewiring process yourself. > >T. >T. > > >On Thu, Sep 3, 2015 at 6:25 PM, Qunawei Zhang <[email protected]> >wrote: >> Hello: >> >> I know how to use rewire and deSeq to randomize a network and keep the >> degree of the nodes. >> I have a protein-protein interaction network (192 nodes and 561 edges). >> Unlike other protein-protein interaction network, I found the >>interactions >> among hubs are not suppressed. I want to test whether this topology will >> make the subnetwork more vulnerable for random attacks. >> So I need some random network for comparison. To randomize the network >>I >> want to reduce the interactions among hub genes and on the other hand >> increase the number of interactions among hubs and non hubs. Is it >>possible >> to used some existing method in igraph to get this? >> >> Many thanks >> >> Best >> Quanwei >> >> >> >> _______________________________________________ >> igraph-help mailing list >> [email protected] >> https://lists.nongnu.org/mailman/listinfo/igraph-help >> > >_______________________________________________ >igraph-help mailing list >[email protected] >https://lists.nongnu.org/mailman/listinfo/igraph-help _______________________________________________ igraph-help mailing list [email protected] https://lists.nongnu.org/mailman/listinfo/igraph-help
