Oh ok. It would have to be re-coded? I will definitely take a look at your tool. Thank you Tamas!!!!
BH On Thu, Oct 8, 2015 at 11:15 AM, Tamás Nepusz <[email protected]> wrote: > Hi, > > This is not possible with the label propagation algorithm, but it's very > similar to what I have implemented in another tool; see: > > https://github.com/ntamas/cl1 > > T. > > On 8 Oct 2015, at 16:16, Benika H <[email protected]> wrote: > > Hi, I have a set of genes and I was wondering if I could set these genes > as my initial nodes and expand from those nodes with the label propagation > algorithm? I want to set these as seed nodes and do a seek-and-expand > approach to generate the network. Is this possible with igraph? > > BH > > On Thu, Oct 1, 2015 at 3:41 AM, Szabolcs Horvát <[email protected]> > wrote: > >> Most igraph functions are implemented in C, not in R. You'll find all >> the igraph source code on GitHub: https://github.com/igraph/ There's >> a link at the top right of the igraph.org homepage. >> >> The label propagation algorithm is here: >> >> https://github.com/igraph/igraph/blob/master/src/community.c#L2127 >> >> On 29 September 2015 at 19:02, Benika H <[email protected]> wrote: >> > Hi. I would like to use the R source code for the label propagation >> > algorithm. Is there a version on GitHub or available elsewhere? I'm >> trying >> > to set a group of nodes as seed nodes and determine neighbors. >> Therefore, I >> > would like to modify the code for this use. >> > >> > >> > Thank you, >> > >> > BH >> > >> > _______________________________________________ >> > igraph-help mailing list >> > [email protected] >> > https://lists.nongnu.org/mailman/listinfo/igraph-help >> > >> >> _______________________________________________ >> igraph-help mailing list >> [email protected] >> https://lists.nongnu.org/mailman/listinfo/igraph-help >> > > _______________________________________________ > igraph-help mailing list > [email protected] > https://lists.nongnu.org/mailman/listinfo/igraph-help > > > _______________________________________________ > igraph-help mailing list > [email protected] > https://lists.nongnu.org/mailman/listinfo/igraph-help > >
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