Dear All, I have a network generated based on PPI for a list of candidate genes with order = 2 (neighbourhood).
neighborhood(ppi.graph,order,which(V(ppi.graph)$name %in% genes)) What I really would like is to filter this network such that, I include nodes that have 1 or 2 hops between my Candidate Gene List and not include all the neighbours. Any suggestions on how to arrive at this minimal network with only two hops to connect my candidate gene list. Thanks and regards, Nirmal _______________________________________________ igraph-help mailing list [email protected] https://lists.nongnu.org/mailman/listinfo/igraph-help
