Johannes, oops, forgot to mention here, sorry about that, but my problem was solved by installing a fresh new fiji setup. after that everything worked as expected.
Gerrit. On 13 Feb 2013, at 00:31, Johannes Schindelin <[email protected]> wrote: > Hi Gerrit, > > On Wed, 13 Feb 2013, Johannes Schindelin wrote: > >> On Tue, 12 Feb 2013, Johannes Schindelin wrote: >> >> I guess the problem is as I indicated a couple of weeks ago (and as you >> might have guessed, I really did not get around to take care of it until >> today): initializing upload sites via SSH only works if you have >> ij-updater-ssh.jar installed (it comes from the ImageJ update site and >> is *not* installed by default). >> >> So for the time being, could you look for that file in the uninstalled >> files view in the advanced mode of the updater and install it? > > Actually, it seems that something else went wrong in your Fiji. Is there > some other message in the Console before what you reported? I do get > something along the lines > > ... > 'jars/rsyntaxtextarea.jar' from update site 'Fiji' shadows the one > from update site 'ImageJ' > Found 293 plugins. > Created service: imagej.htread.DefaultThreadService > Created service: imagej.event.DefaultEventService > Created service: imagej.plugin.DefaultPluginService > Found 3 upload mechanisms. > ... > > Later on I do get > > ... > Found 219 plugins. > Created service: imagej.htread.DefaultThreadService > Created service: imagej.event.DefaultEventService > Created service: imagej.plugin.DefaultPluginService > Found 1 upload mechanisms. > ... > > and then when I try something similar to you (initialize an update site > via SSH), after tons of "file: ..." and "dependency ..." lines: > > Uncaught exception in thread Thread[AWT-EventQueue-0,6,main] > java.lang.IllegalArgumentException: No uploader found for protocol ssh > ... > > I will work on that issue (which can be worked around as I suggested, by > installing ij-updater-ssh.jar first, or as I suggested originally, by > installing to a local directory using the file:localhost "SSH host" and > then copying the files over to the final destination) that the SSH upload > protocol should be installed transparently when needed. > > Ciao, > Johannes > > -------------------------------------------------- dr. ing. G (Gerrit) Polder Wageningen UR, Biometris P.O.Box 100, 6700 AC Wageningen, the Netherlands http://www.wageningenur.nl/en/Persons/dr.ing.-G-Gerrit-Polder.htm email: [email protected] phone: +31.317.480751
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