Hi all, I think I'm suffering from the problem addressed by commit c078b33fd<https://github.com/scijava/scijava-common/commit/c078b33fd290fd552f2adeb2bccbe8e0d284d963>to scijava-common. On the Mac, CellProfiler is compiling annotations at runtime after having moved the Jar files from their original location - I don't know if that's the problem, but the upshot is that the indexing process fails when I try to create a context.
I'm using the POMs for the Beta7.7 release and was hoping I could pick up scijava-common 2.11.0 in order to get that patch, but 8ab5f0db<https://github.com/scijava/scijava-common/commit/8ab5f9db5740c8f6debc78334a3aec7be51a2adb> changes the interface to Contextual, so oil and water don't mix for now. Any suggestions? I'm thinking of cherrypicking c078b33fd to scijava-common 2.9 and including the resulting EclipseHelper in my own JAR that will get loaded ahead of scijava-common.jar. Offending CellProfiler console output below... [ECLIPSE HELPER] Indexing annotations... Warning: could not load class 'jars.JavaScript.JavaScript' (jars/JavaScript/JavaScript (wrong name: JavaScript)); skipping Warning: could not load class 'jars.JavaScript.org.mozilla.classfile.ByteCode' (jars/JavaScript/org/mozilla/classfile/ByteCode (wrong name: org/mozilla/classfile/ByteCode)); skipping Warning: could not load class 'jars.JavaScript.org.mozilla.classfile.ClassFileField' (jars/JavaScript/org/mozilla/classfile/ClassFileField (wrong name: org/mozilla/classfile/ClassFileField)); skipping ... more of same... Thx in advance, Lee
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