Inline::Files does not play nicely with other modules that do I/O (as Bio::DB::GFF does). In general, Inline::Files is a nice little toy for stand-alone scripts that don't make large use of other modules, but it's not exactly a well-supported project (probably because the extreme magic going on under the hood just can't play well with others).
-Aaron On 17 Mar 2003, Venky Nandagopal wrote: > > Hi, > Is there a known bug in Inline or Inline::CPP that does not allow you to > 'use' modules of the type A::B::C? > > I dont see the following errors if I remove 'use Bio::DB::GFF' ; I see > very similar errors( the first Files::Virtual::... error is identical) > if I use Chart::Graph::Gnuplot. Both modules are installed correctly on > my computer, I've used them before in other scripts. > > I get this error when I use Bio::DB::GFF: > > Too many arguments for Inline::Files::Virtual::vf_truncate at > /usr/lib/perl5/5.8.0/i386-linux-thread-multi/IO/Handle.pm line 422, near > "])" > BEGIN not safe after errors--compilation aborted at > /usr/lib/perl5/5.8.0/i386-linux-thread-multi/IO/Handle.pm line 592. > Compilation failed in require at > /usr/lib/perl5/site_perl/5.8.0/Bio/Root/IO.pm line 101. > BEGIN failed--compilation aborted at > /usr/lib/perl5/site_perl/5.8.0/Bio/Root/IO.pm line 101. > Compilation failed in require at > /usr/lib/perl5/site_perl/5.8.0/Bio/Root/Root.pm line 153. > BEGIN failed--compilation aborted at > /usr/lib/perl5/site_perl/5.8.0/Bio/Root/Root.pm line 153. > Compilation failed in require at > /usr/lib/perl5/site_perl/5.8.0/Bio/DB/GFF/Typename.pm line 29. > BEGIN failed--compilation aborted at > /usr/lib/perl5/site_perl/5.8.0/Bio/DB/GFF/Typename.pm line 29. > Compilation failed in require at > /usr/lib/perl5/site_perl/5.8.0/Bio/DB/GFF/Feature.pm line 71. > BEGIN failed--compilation aborted at > /usr/lib/perl5/site_perl/5.8.0/Bio/DB/GFF/Feature.pm line 71. > Compilation failed in require at > /usr/lib/perl5/site_perl/5.8.0/Bio/DB/GFF/RelSegment.pm line 111. > BEGIN failed--compilation aborted at > /usr/lib/perl5/site_perl/5.8.0/Bio/DB/GFF/RelSegment.pm line 111. > Compilation failed in require at > /usr/lib/perl5/site_perl/5.8.0/Bio/DB/GFF.pm line 447. > BEGIN failed--compilation aborted at > /usr/lib/perl5/site_perl/5.8.0/Bio/DB/GFF.pm line 447. > Compilation failed in require at ./pair.pl line 14. > BEGIN failed--compilation aborted at ./pair.pl line 14. > > > Thanks > Venky > > > -- Aaron J Mackey Pearson Laboratory University of Virginia (434) 924-2821 [EMAIL PROTECTED]
