Someone may have beaten me to do this:
It seems the latest Xcode GM beta removed the xcrun binary from the Xcode.app 
embedded toolchain /usr/bin directory, causing Qt's configure command to fail, 
claiming the Xcode license was never accepted.

Attached is a patch that solved the issue for the user who alerted me to the 

diff --git a/qtbase/configure b/qtbase/configure
index 4ce83be..de80807 100755
--- a/qtbase/configure
+++ b/qtbase/configure
@@ -543,7 +543,7 @@ if [ "$BUILD_ON_MAC" = "yes" ]; then
         exit 2
-    if ! /usr/bin/xcrun -find xcrun >/dev/null 2>&1; then
+    if ! /usr/bin/xcrun -find xcodebuild >/dev/null 2>&1; then
         echo >&2
         echo "   Xcode not set up properly. You may need to confirm the license" >&2
         echo "   agreement by running /usr/bin/xcodebuild without arguments." >&2
diff --git a/qtbase/mkspecs/features/mac/default_pre.prf b/qtbase/mkspecs/features/mac/default_pre.prf
index 0cc8cd6..5df99d1 100644
--- a/qtbase/mkspecs/features/mac/default_pre.prf
+++ b/qtbase/mkspecs/features/mac/default_pre.prf
@@ -12,7 +12,7 @@ isEmpty(QMAKE_XCODE_DEVELOPER_PATH) {
         error("Xcode is not installed in $${QMAKE_XCODE_DEVELOPER_PATH}. Please use xcode-select to choose Xcode installation path.")
     # Make sure Xcode is set up properly
-    isEmpty($$list($$system("/usr/bin/xcrun -find xcrun 2>/dev/null"))): \
+    isEmpty($$list($$system("/usr/bin/xcrun -find xcodebuild 2>/dev/null"))): \
         error("Xcode not set up properly. You may need to confirm the license agreement by running /usr/bin/xcodebuild.")
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