I find it very objectionable that the new release does no longer support these two auto features in Proof General. They are part of ongoing research in Munich and are appreciated by many users. If you do not know how to make them work with jedit, this is no reason to disable them under Proof General. Isabelle is a joint project and such wide-ranging changes must be discussed beforehand. Can you put them back to allow users of the development version to be as productive as before?
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