[
https://issues.apache.org/jira/browse/AIRAVATA-1742?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Eroma updated AIRAVATA-1742:
----------------------------
Description:
When experiments are created and launched they fail with error message [1] due
to error in uploading input files.
In experiment summary experiment inputs are not displayed.
This is applicable for applications which require input files, string inputs,
etc...
NOTE: Even though string inputs are not displayed they work; the issue is only
with uploading files.
[1]
org.apache.airavata.gfac.core.handler.GFacHandlerException: Error while input
File Staging at
org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.java:191)
at
org.apache.airavata.gfac.ssh.handler.SSHInputHandler.invoke(SSHInputHandler.java:105)
at
org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:870)
at
org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:661)
at
org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:467)
at
org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:179)
at
org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745) Caused by:
org.apache.airavata.gfac.core.handler.GFacHandlerException: Error while input
File Staging at
org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.java:183)
... 9 more Caused by: org.apache.airavata.gsi.ssh.api.SSHApiException: Failed
during scping local
file:///home/airavata/input/CloneofCOM_GAU1_a9f9c5c5-621e-4097-ab1f-1dd180118ad9/tempNode_15c9ab7d-1000-4014-9131-f493ff3a5c12/experimentData
to remote file comet.sdsc.edu:rFile :
/tmp/CloneofCOM_GAU1_a9f9c5c5-621e-4097-ab1f-1dd180118ad9/experimentData at
org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.scpTo(GSISSHAbstractCluster.java:470)
at
org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.ja
was:
When experiments are created and launched they fail with error message [1] due
to error in uploading input files.
In experiment summary experiment inputs are not displayed.
This is applicable for applications which require input files, string inputs,
etc...
NOTE: Even though string inputs are not displayed they work; the issue is only
with uploading files.
> In experiment summary page inputs are not displayed; Input files are not
> uploaded from PGA
> ------------------------------------------------------------------------------------------
>
> Key: AIRAVATA-1742
> URL: https://issues.apache.org/jira/browse/AIRAVATA-1742
> Project: Airavata
> Issue Type: Bug
> Components: PGA PHP Web Gateway
> Affects Versions: 0.15
> Environment: http://test-drive.airavata.org/pga/public/
> Reporter: Eroma
> Assignee: Supun Chathuranga Nakandala
> Priority: Blocker
>
> When experiments are created and launched they fail with error message [1]
> due to error in uploading input files.
> In experiment summary experiment inputs are not displayed.
> This is applicable for applications which require input files, string inputs,
> etc...
> NOTE: Even though string inputs are not displayed they work; the issue is
> only with uploading files.
> [1]
> org.apache.airavata.gfac.core.handler.GFacHandlerException: Error while input
> File Staging at
> org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.java:191)
> at
> org.apache.airavata.gfac.ssh.handler.SSHInputHandler.invoke(SSHInputHandler.java:105)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:870)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:661)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:467)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:179)
> at
> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:745) Caused by:
> org.apache.airavata.gfac.core.handler.GFacHandlerException: Error while input
> File Staging at
> org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.java:183)
> ... 9 more Caused by: org.apache.airavata.gsi.ssh.api.SSHApiException:
> Failed during scping local
> file:///home/airavata/input/CloneofCOM_GAU1_a9f9c5c5-621e-4097-ab1f-1dd180118ad9/tempNode_15c9ab7d-1000-4014-9131-f493ff3a5c12/experimentData
> to remote file comet.sdsc.edu:rFile :
> /tmp/CloneofCOM_GAU1_a9f9c5c5-621e-4097-ab1f-1dd180118ad9/experimentData at
> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.scpTo(GSISSHAbstractCluster.java:470)
> at
> org.apache.airavata.gfac.ssh.handler.SSHInputHandler.stageInputFiles(SSHInputHandler.ja
--
This message was sent by Atlassian JIRA
(v6.3.4#6332)
