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https://issues.apache.org/jira/browse/ARROW-1659?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
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Wes McKinney updated ARROW-1659:
--------------------------------
Summary: [C++] Error building when cross-compiling for RISC-V with GCC 7.2
(was: "stdlib.h: No such file or directory" when cross-compiling for RISC-V
with GCC 7.2)
> [C++] Error building when cross-compiling for RISC-V with GCC 7.2
> -----------------------------------------------------------------
>
> Key: ARROW-1659
> URL: https://issues.apache.org/jira/browse/ARROW-1659
> Project: Apache Arrow
> Issue Type: Bug
> Components: C++
> Environment: RISC-V, Cross-compiling for RISC-V Linux with GCC 7.2
> Reporter: Alon Amid
> Priority: Major
>
> I’ve been attempting to cross-compile Arrow for RISC-V.
> I was trying to build Arrow with Plasma and Python, but without the
> compression libraries (snappy, brotli, zstd, lz4).
> I was getting several errors indicating that stdlib.h is missing. An example
> error is:
> | In file included from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include/c++/7.2.0/ext/string_conversions.h:41:0,
> | from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include/c++/7.2.0/bits/basic_string.h:6159,
> | from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include/c++/7.2.0/string:52,
> | from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include/c++/7.2.0/stdexcept:39,
> | from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include/c++/7.2.0/array:39,
> | from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include/c++/7.2.0/tuple:39,
> | from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include/c++/7.2.0/bits/unique_ptr.h:37,
> | from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include/c++/7.2.0/memory:80,
> | from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/arrow-apache-arrow-0.7.1/cpp/src/arrow/io/interfaces.h:22,
> | from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/arrow-apache-arrow-0.7.1/cpp/src/arrow/python/io.h:21,
> | from
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/arrow-apache-arrow-0.7.1/cpp/src/arrow/python/io.cc:18:
> |
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include/c++/7.2.0/cstdlib:75:15:
> fatal error: stdlib.h: No such file or directory
> | #include_next <stdlib.h>
> | ^~~~~~~~~~
> | compilation terminated.
> The relevant example call is:
> cd
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/build/src/arrow/python
> &&
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot-native/usr/bin/riscv64-poky-linux/riscv64-poky-linux-g++
> -isystem
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include
> -isystem
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/build/src/rapidjson_ep/include
> -isystem
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/build/flatbuffers_ep-prefix/src/flatbuffers_ep-install/include
> -isystem
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/arrow-apache-arrow-0.7.1/cpp/thirdparty/hadoop/include
>
> -I/home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/arrow-apache-arrow-0.7.1/cpp/src
> -isystem
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot-native/usr/lib/python2.7/site-packages/numpy/core/include
> -isystem
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include/python2.7
>
> --sysroot=/home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot
> -O2 -pipe -g -feliminate-unused-debug-types
> -fdebug-prefix-map=/home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0=/usr/src/debug/apache-arrow/0.7.1-r0
>
> -fdebug-prefix-map=/home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot-native=
>
> -fdebug-prefix-map=/home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot=
> -fvisibility-inlines-hidden
> --sysroot=/home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot
> -ggdb -O0 -Wall -std=c++11 -g -fPIC -std=gnu++11 -o
> CMakeFiles/arrow_python_objlib.dir/io.cc.o -c
> /home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/arrow-apache-arrow-0.7.1/cpp/src/arrow/python/io.cc
> When I manually checked the highlighted path
> (/home/centos/riscv-poky/build/tmp/work/riscv64-poky-linux/apache-arrow/0.7.1-r0/recipe-sysroot/usr/include),
> stdlib.h is indeed there.
> While googling for similar errors, I found these references:
> https://github.com/OpenLightingProject/ola/pull/1132,
> https://gcc.gnu.org/bugzilla/show_bug.cgi?id=70129 , which seem to describe
> a similar scenario.
> As can be seen in the example call, most of the include directories are
> included using -isystem rather than -I.
> When looking further into Arrow’s cmake files, this seems intentional:
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake:include_directories(SYSTEM
> ${Boost_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${GTEST_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${GFLAGS_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${GBENCHMARK_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${RAPIDJSON_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${FLATBUFFERS_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${JEMALLOC_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake:include_directories(SYSTEM
> "${HADOOP_HOME}/include")
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${ZLIB_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${SNAPPY_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${BROTLI_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${LZ4_INCLUDE_DIR})
> ./cpp/cmake_modules/ThirdpartyToolchain.cmake: include_directories(SYSTEM
> ${ZSTD_INCLUDE_DIR})
> ./cpp/src/arrow/gpu/CMakeLists.txt:include_directories(SYSTEM
> ${CUDA_INCLUDE_DIRS})
> ./cpp/src/plasma/CMakeLists.txt:include_directories(SYSTEM
> ${PYTHON_INCLUDE_DIRS})
> ./cpp/CMakeLists.txt: include_directories(SYSTEM
> ./python/CMakeLists.txt:include_directories(SYSTEM
> ./python/CMakeLists.txt:include_directories(SYSTEM ${ARROW_INCLUDE_DIR})
> ./python/CMakeLists.txt: include_directories(SYSTEM ${PARQUET_INCLUDE_DIR})
> ./python/CMakeLists.txt: include_directories(SYSTEM ${PLASMA_INCLUDE_DIR})
> Since compiling for RISC-V requires GCC 7.2, It is likely that this is the
> same issue that is exposed by using GCC version 6.0 and above is the
> previously mentioned references
> (https://gcc.gnu.org/bugzilla/show_bug.cgi?id=70129 and
> https://github.com/OpenLightingProject/ola/pull/1132)
> I mitigated the issue temporarily by setting the following in
> cpp/CMakeLists.txt:
> set(CMAKE_INCLUDE_SYSTEM_FLAG_CXX "-I ")
> However, I think this should be done anytime GCC 6.0 or higher is used.
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