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https://issues.apache.org/jira/browse/BEAM-10601?focusedWorklogId=465143&page=com.atlassian.jira.plugin.system.issuetabpanels:worklog-tabpanel#worklog-465143
]
ASF GitHub Bot logged work on BEAM-10601:
-----------------------------------------
Author: ASF GitHub Bot
Created on: 31/Jul/20 19:25
Start Date: 31/Jul/20 19:25
Worklog Time Spent: 10m
Work Description: pabloem commented on a change in pull request #12331:
URL: https://github.com/apache/beam/pull/12331#discussion_r463788480
##########
File path: sdks/python/apache_beam/io/gcp/dicomio.py
##########
@@ -167,33 +167,40 @@ class DicomSearch(PTransform):
}
"""
- def __init__(self, buffer_size=8, max_workers=5, credential=None):
+ def __init__(
+ self, buffer_size=8, max_workers=5, client=None, credential=None):
"""Initializes DicomSearch.
Args:
credential: # type: Google credential object, if it is specified, the
Http client will use it to create sessions instead of the default.
"""
self.buffer_size = buffer_size
self.max_workers = max_workers
+ if not client:
+ self.client = DicomApiHttpClient()
+ else:
+ self.client = client
Review comment:
it's not that important, but you can do `self.client = client or
DicomApiHttpClient()`
Feel free to add it if you have the time.
##########
File path: sdks/python/setup.py
##########
@@ -128,6 +128,7 @@ def get_version():
cythonize = lambda *args, **kwargs: []
REQUIRED_PACKAGES = [
+ 'google-auth>=1.18.0,<=1.20.0',
Review comment:
ah that's right. You need to skip the test when GCP dependencies are
missing. Check how we do it for gcs filesystem:
https://github.com/apache/beam/blob/master/sdks/python/apache_beam/io/gcp/gcsfilesystem_test.py#L39-L47
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Issue Time Tracking
-------------------
Worklog Id: (was: 465143)
Time Spent: 2.5h (was: 2h 20m)
> DICOM API Beam IO connector
> ---------------------------
>
> Key: BEAM-10601
> URL: https://issues.apache.org/jira/browse/BEAM-10601
> Project: Beam
> Issue Type: New Feature
> Components: io-py-gcp
> Reporter: Jiahao Wu
> Assignee: Jiahao Wu
> Priority: P2
> Time Spent: 2.5h
> Remaining Estimate: 0h
>
> Create a new Apache Beam I/O connector that helps customers facilitate the
> reading and writing data to the DICOM Healthcare API, it has three components:
> # An Ptransform that takes QIDO request and output result metadata as
> pcollection.
> # An I/O sink that takes DICOM files and writes them to DICOM store via API.
> # An Ptransform that convert pubsub message to Qido search request.
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