[ 
https://issues.apache.org/jira/browse/BEAM-11355?focusedWorklogId=516891&page=com.atlassian.jira.plugin.system.issuetabpanels:worklog-tabpanel#worklog-516891
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ASF GitHub Bot logged work on BEAM-11355:
-----------------------------------------

                Author: ASF GitHub Bot
            Created on: 26/Nov/20 01:45
            Start Date: 26/Nov/20 01:45
    Worklog Time Spent: 10m 
      Work Description: yifanmai opened a new pull request #13432:
URL: https://github.com/apache/beam/pull/13432


   Under some conditions, `translations.pipeline_from_stages()` after 
`translations.sort_stages()` could return a pipeline that was not topologically 
sorted due the construction of the tree of parents to subtransforms. This 
change ensures that the pipeline is topologically ordered by ensuring that when 
a transform is added to the pipeline, each of its ancestors become the last 
subtransform of its parent.
   
   ------------------------
   
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Issue Time Tracking
-------------------

            Worklog Id:     (was: 516891)
    Remaining Estimate: 0h
            Time Spent: 10m

> pipeline_from_stages after sort_stages can return non-topologically ordered 
> pipelines
> -------------------------------------------------------------------------------------
>
>                 Key: BEAM-11355
>                 URL: https://issues.apache.org/jira/browse/BEAM-11355
>             Project: Beam
>          Issue Type: Bug
>          Components: sdk-py-core
>            Reporter: Yifan Mai
>            Assignee: Yifan Mai
>            Priority: P2
>          Time Spent: 10m
>  Remaining Estimate: 0h
>
> translations.sort_stages() sorts stages in topological order. However, 
> calling translations.pipeline_from_stages() on sorted stages can result in a 
> pipeline that is not topologically ordered. This is because of how it 
> constructs the tree of parent to subtransforms.
> Example pipeline:
>  * Leaf transforms are A, B and C.
>  * Composite transform D has subtransforms B and C.
>  * Root transform E has subtransforms A and D.
>  * A produces an output that is an input to C, and B produces an output that 
> is an input to C.
>  * After optimizations and sort stages, the order of leaf stages is B, A, C 
> (this is a valid ordering)
> Under the current implementation of translations.pipeline_from_stages():
>  # B is added to the pipeline first, which also adds its parent D and its 
> grandparent E to the pipeline. D is added as the first subtransform of E and 
> B is added as the first subtransform of D.
>  # A is added to the pipeline second. A is added as the second subtransform 
> of E.
>  # C is added to the pipeline third. C is added as the second subtransform of 
> D.
> The order is now E(D(B, C), A) which is invalid because C must follow A. A 
> valid order would be E(A, D(B, C)).
> The easiest fix is to change translations.pipeline_from_stages() such that 
> whenever a leaf transform is added to the pipeline, all its ancestors are 
> moved to the last position of the subtransforms of their respective parent.



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