[
https://issues.apache.org/jira/browse/BEAM-11626?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Tomo Suzuki updated BEAM-11626:
-------------------------------
Description:
Related to https://issues.apache.org/jira/browse/BEAM-5559
As per BEAM-8911, Cassandra-all requires Guava 25.1. But other parts of Beam
dependencies (such as gcsio) may want to use newer version of Guava. Excerpt
from Kiley's finding using Linkage Checker today:
{noformat}
(com.google.guava:guava:25.1-jre)
com.google.common.util.concurrent.Uninterruptibles's method
sleepUninterruptibly(java.time.Duration) is not found;
referenced by 3 class files
com.google.cloud.hadoop.gcsio.cooplock.CoopLockOperationDao
(com.google.cloud.bigdataoss:gcsio:2.1.6)
com.google.cloud.hadoop.gcsio.cooplock.CoopLockRecordsDao
(com.google.cloud.bigdataoss:gcsio:2.1.6)
com.google.cloud.hadoop.gcsio.testing.InMemoryObjectEntry
(com.google.cloud.bigdataoss:gcsio:2.1.6)
{noformat}
Note that Guava's
[Uninterruptibles.sleepUninterruptibly(Duration)|https://guava.dev/releases/30.1-jre/api/docs/com/google/common/util/concurrent/Uninterruptibles.html#sleepUninterruptibly(java.time.Duration)]
has been introduced since 28.0.
This ticket is attempts to declare the newer version of Guava while keeping the
Guava version used by Beam's Cassandra tests.
h1. Failures with Guava 30.1-jre
With simply upgrading Guava version to 30.1-jre
([35f5b0|https://github.com/apache/beam/commit/35f5b0597e62563d843c9b3a7876212967b0a63c]),
I get the following errors:
https://gist.github.com/suztomo/f7bbf77b54265eb80fd3c2d230b678dc
Failures in my local tests:
org.apache.beam.sdk.io.hdfs.HadoopFileSystemRegistrarTest and other tests in
the package:
{noformat}
java.lang.NoSuchMethodError:
com.google.common.util.concurrent.Futures.addCallback(Lcom/google/common/util/concurrent/ListenableFuture;Lcom/google/common/util/concurrent/FutureCallback;)V
at
org.apache.hadoop.hdfs.server.datanode.checker.ThrottledAsyncChecker.addResultCachingCallback(ThrottledAsyncChecker.java:167)
at
org.apache.hadoop.hdfs.server.datanode.checker.ThrottledAsyncChecker.schedule(ThrottledAsyncChecker.java:156)
at
org.apache.hadoop.hdfs.server.datanode.checker.StorageLocationChecker.check(StorageLocationChecker.java:165)
at
org.apache.hadoop.hdfs.server.datanode.DataNode.makeInstance(DataNode.java:2703)
at
org.apache.hadoop.hdfs.server.datanode.DataNode.instantiateDataNode(DataNode.java:2613)
at
org.apache.hadoop.hdfs.MiniDFSCluster.startDataNodes(MiniDFSCluster.java:1683)
at
org.apache.hadoop.hdfs.MiniDFSCluster.initMiniDFSCluster(MiniDFSCluster.java:905)
at org.apache.hadoop.hdfs.MiniDFSCluster.<init>(MiniDFSCluster.java:517)
at
org.apache.hadoop.hdfs.MiniDFSCluster$Builder.build(MiniDFSCluster.java:476)
at
org.apache.beam.sdk.io.hdfs.HadoopFileSystemRegistrarTest.setUp(HadoopFileSystemRegistrarTest.java:58)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
{noformat}
This error appears in the following tests in sdks/java/io/hadoop-file-system
module:
{noformat}
Test Result (22 failures / +22)
org.apache.beam.sdk.io.hdfs.HadoopFileSystemRegistrarTest.testServiceLoader
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testDeleteNonExisting
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testRenameExistingDestination
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testMatch
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testCopy
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testMatchForNonExistentFile
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testCreateAndReadFile
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testMatchDirectory
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testRenameRetryScenario
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testRenameMissingTargetDir
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testCreateAndReadFileWithShift
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testCreateAndReadFileWithShiftToEnd
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testCopySourceMissing
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testRenameMissingSource
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testMatchNewResource
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testMatchForRecursiveGlob
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testDelete
org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testRename
org.apache.beam.sdk.io.hdfs.HadoopResourceIdTest.testGetFilename
org.apache.beam.sdk.io.hdfs.HadoopResourceIdTest.testResourceIdTester
{noformat}
The deprecated
[Futures.addCallback|https://guava.dev/releases/25.1-jre/api/docs/com/google/common/util/concurrent/Futures.html]
has been removed since 26.0.
and another error due to Guava version:
{noformat}
java.lang.RuntimeException: java.util.concurrent.ExecutionException:
java.lang.NoSuchFieldError: DIGIT
at
org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:442)
at
org.apache.cassandra.db.SystemKeyspace.forceBlockingFlush(SystemKeyspace.java:829)
at
org.apache.cassandra.db.SystemKeyspace.removeTruncationRecord(SystemKeyspace.java:668)
at
org.apache.cassandra.db.ColumnFamilyStore.invalidate(ColumnFamilyStore.java:568)
at
org.apache.cassandra.db.ColumnFamilyStore.invalidate(ColumnFamilyStore.java:544)
at
org.apache.cassandra.schema.LegacySchemaMigrator.lambda$unloadLegacySchemaTables$1(LegacySchemaMigrator.java:137)
at
com.google.common.collect.ImmutableList.forEach(ImmutableList.java:406)
at
org.apache.cassandra.schema.LegacySchemaMigrator.unloadLegacySchemaTables(LegacySchemaMigrator.java:137)
at
org.apache.cassandra.schema.LegacySchemaMigrator.migrate(LegacySchemaMigrator.java:83)
at
org.apache.cassandra.service.CassandraDaemon.setup(CassandraDaemon.java:252)
at
org.apache.cassandra.service.CassandraDaemon.init(CassandraDaemon.java:513)
at
org.apache.cassandra.service.EmbeddedCassandraService.start(EmbeddedCassandraService.java:51)
at
org.apache.beam.sdk.io.hadoop.format.HadoopFormatIOCassandraTest.beforeClass(HadoopFormatIOCassandraTest.java:192)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
{noformat}
This error appear in this test in sdks/java/io/hadoop-format module:
{noformat}
org.apache.beam.sdk.io.hadoop.format.HadoopFormatIOCassandraTest.classMethod
{noformat}
The build (master) fails in my machine:
{noformat}
suztomo@suztomo:~/beam$ ./gradlew :sdks:java:io:cassandra:test
Configuration on demand is an incubating feature.
> Task :sdks:java:io:cassandra:test
#
# A fatal error has been detected by the Java Runtime Environment:
#
# SIGSEGV (0xb) at pc=0x00007fbdbc875a3f, pid=3453267, tid=0x000000000034b177
#
# JRE version: OpenJDK Runtime Environment (8.0_181) (build
1.8.0_181-google-v7-341329124-341329124)
# Java VM: OpenJDK 64-Bit Server VM (25.181-b01 mixed mode linux-amd64
compressed oops)
# Problematic frame:
# C [libc.so.6+0xbaa3f] __gettimeofday+0x7f
#
# Failed to write core dump. Core dumps have been disabled. To enable core
dumping, try "ulimit -c unlimited" before starting Java again
...
{noformat}
{{:sdks:java:io:cassandra:test}} works in my MacBook Pro. Other tests in
{{:sdks:java:io}} passed in Linux.
was:
Related to https://issues.apache.org/jira/browse/BEAM-5559
As per BEAM-8911, Cassandra-all requires Guava 25.1. But other parts of Beam
dependencies (such as gcsio) may want to use newer version of Guava. Excerpt
from Kiley's finding using Linkage Checker today:
{noformat}
(com.google.guava:guava:25.1-jre)
com.google.common.util.concurrent.Uninterruptibles's method
sleepUninterruptibly(java.time.Duration) is not found;
referenced by 3 class files
com.google.cloud.hadoop.gcsio.cooplock.CoopLockOperationDao
(com.google.cloud.bigdataoss:gcsio:2.1.6)
com.google.cloud.hadoop.gcsio.cooplock.CoopLockRecordsDao
(com.google.cloud.bigdataoss:gcsio:2.1.6)
com.google.cloud.hadoop.gcsio.testing.InMemoryObjectEntry
(com.google.cloud.bigdataoss:gcsio:2.1.6)
{noformat}
Note that Guava's
[Uninterruptibles.sleepUninterruptibly(Duration)|https://guava.dev/releases/30.1-jre/api/docs/com/google/common/util/concurrent/Uninterruptibles.html#sleepUninterruptibly(java.time.Duration)]
has been introduced since 28.0.
This ticket is attempts to declare the newer version of Guava while keeping the
Guava version used by Beam's Cassandra tests.
h1. Failures with Guava 30.1-jre
https://gist.github.com/suztomo/f7bbf77b54265eb80fd3c2d230b678dc
Failures in my local tests:
org.apache.beam.sdk.io.hdfs.HadoopFileSystemRegistrarTest and other tests in
the package:
{noformat}
java.lang.NoSuchMethodError:
com.google.common.util.concurrent.Futures.addCallback(Lcom/google/common/util/concurrent/ListenableFuture;Lcom/google/common/util/concurrent/FutureCallback;)V
at
org.apache.hadoop.hdfs.server.datanode.checker.ThrottledAsyncChecker.addResultCachingCallback(ThrottledAsyncChecker.java:167)
at
org.apache.hadoop.hdfs.server.datanode.checker.ThrottledAsyncChecker.schedule(ThrottledAsyncChecker.java:156)
at
org.apache.hadoop.hdfs.server.datanode.checker.StorageLocationChecker.check(StorageLocationChecker.java:165)
at
org.apache.hadoop.hdfs.server.datanode.DataNode.makeInstance(DataNode.java:2703)
at
org.apache.hadoop.hdfs.server.datanode.DataNode.instantiateDataNode(DataNode.java:2613)
at
org.apache.hadoop.hdfs.MiniDFSCluster.startDataNodes(MiniDFSCluster.java:1683)
at
org.apache.hadoop.hdfs.MiniDFSCluster.initMiniDFSCluster(MiniDFSCluster.java:905)
at org.apache.hadoop.hdfs.MiniDFSCluster.<init>(MiniDFSCluster.java:517)
at
org.apache.hadoop.hdfs.MiniDFSCluster$Builder.build(MiniDFSCluster.java:476)
at
org.apache.beam.sdk.io.hdfs.HadoopFileSystemRegistrarTest.setUp(HadoopFileSystemRegistrarTest.java:58)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
{noformat}
The deprecated
[Futures.addCallback|https://guava.dev/releases/25.1-jre/api/docs/com/google/common/util/concurrent/Futures.html]
has been removed since 26.0.
The build (master) fails in my machine:
{noformat}
suztomo@suztomo:~/beam$ ./gradlew :sdks:java:io:cassandra:test
Configuration on demand is an incubating feature.
> Task :sdks:java:io:cassandra:test
#
# A fatal error has been detected by the Java Runtime Environment:
#
# SIGSEGV (0xb) at pc=0x00007fbdbc875a3f, pid=3453267, tid=0x000000000034b177
#
# JRE version: OpenJDK Runtime Environment (8.0_181) (build
1.8.0_181-google-v7-341329124-341329124)
# Java VM: OpenJDK 64-Bit Server VM (25.181-b01 mixed mode linux-amd64
compressed oops)
# Problematic frame:
# C [libc.so.6+0xbaa3f] __gettimeofday+0x7f
#
# Failed to write core dump. Core dumps have been disabled. To enable core
dumping, try "ulimit -c unlimited" before starting Java again
...
{noformat}
{{:sdks:java:io:cassandra:test}} works in my MacBook Pro. Other tests in
{{:sdks:java:io}} passed in Linux.
> Upgrade non-vendored Guava to the latest version
> ------------------------------------------------
>
> Key: BEAM-11626
> URL: https://issues.apache.org/jira/browse/BEAM-11626
> Project: Beam
> Issue Type: Improvement
> Components: build-system
> Reporter: Tomo Suzuki
> Assignee: Tomo Suzuki
> Priority: P2
> Time Spent: 6h 20m
> Remaining Estimate: 0h
>
> Related to https://issues.apache.org/jira/browse/BEAM-5559
> As per BEAM-8911, Cassandra-all requires Guava 25.1. But other parts of Beam
> dependencies (such as gcsio) may want to use newer version of Guava. Excerpt
> from Kiley's finding using Linkage Checker today:
> {noformat}
> (com.google.guava:guava:25.1-jre)
> com.google.common.util.concurrent.Uninterruptibles's method
> sleepUninterruptibly(java.time.Duration) is not found;
> referenced by 3 class files
> com.google.cloud.hadoop.gcsio.cooplock.CoopLockOperationDao
> (com.google.cloud.bigdataoss:gcsio:2.1.6)
> com.google.cloud.hadoop.gcsio.cooplock.CoopLockRecordsDao
> (com.google.cloud.bigdataoss:gcsio:2.1.6)
> com.google.cloud.hadoop.gcsio.testing.InMemoryObjectEntry
> (com.google.cloud.bigdataoss:gcsio:2.1.6)
> {noformat}
> Note that Guava's
> [Uninterruptibles.sleepUninterruptibly(Duration)|https://guava.dev/releases/30.1-jre/api/docs/com/google/common/util/concurrent/Uninterruptibles.html#sleepUninterruptibly(java.time.Duration)]
> has been introduced since 28.0.
> This ticket is attempts to declare the newer version of Guava while keeping
> the Guava version used by Beam's Cassandra tests.
> h1. Failures with Guava 30.1-jre
> With simply upgrading Guava version to 30.1-jre
> ([35f5b0|https://github.com/apache/beam/commit/35f5b0597e62563d843c9b3a7876212967b0a63c]),
> I get the following errors:
> https://gist.github.com/suztomo/f7bbf77b54265eb80fd3c2d230b678dc
> Failures in my local tests:
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemRegistrarTest and other tests in
> the package:
> {noformat}
> java.lang.NoSuchMethodError:
> com.google.common.util.concurrent.Futures.addCallback(Lcom/google/common/util/concurrent/ListenableFuture;Lcom/google/common/util/concurrent/FutureCallback;)V
> at
> org.apache.hadoop.hdfs.server.datanode.checker.ThrottledAsyncChecker.addResultCachingCallback(ThrottledAsyncChecker.java:167)
> at
> org.apache.hadoop.hdfs.server.datanode.checker.ThrottledAsyncChecker.schedule(ThrottledAsyncChecker.java:156)
> at
> org.apache.hadoop.hdfs.server.datanode.checker.StorageLocationChecker.check(StorageLocationChecker.java:165)
> at
> org.apache.hadoop.hdfs.server.datanode.DataNode.makeInstance(DataNode.java:2703)
> at
> org.apache.hadoop.hdfs.server.datanode.DataNode.instantiateDataNode(DataNode.java:2613)
> at
> org.apache.hadoop.hdfs.MiniDFSCluster.startDataNodes(MiniDFSCluster.java:1683)
> at
> org.apache.hadoop.hdfs.MiniDFSCluster.initMiniDFSCluster(MiniDFSCluster.java:905)
> at org.apache.hadoop.hdfs.MiniDFSCluster.<init>(MiniDFSCluster.java:517)
> at
> org.apache.hadoop.hdfs.MiniDFSCluster$Builder.build(MiniDFSCluster.java:476)
> at
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemRegistrarTest.setUp(HadoopFileSystemRegistrarTest.java:58)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> {noformat}
> This error appears in the following tests in sdks/java/io/hadoop-file-system
> module:
> {noformat}
> Test Result (22 failures / +22)
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemRegistrarTest.testServiceLoader
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testDeleteNonExisting
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testRenameExistingDestination
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testMatch
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testCopy
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testMatchForNonExistentFile
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testCreateAndReadFile
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testMatchDirectory
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testRenameRetryScenario
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testRenameMissingTargetDir
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testCreateAndReadFileWithShift
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testCreateAndReadFileWithShiftToEnd
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testCopySourceMissing
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testRenameMissingSource
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testMatchNewResource
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testMatchForRecursiveGlob
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testDelete
> org.apache.beam.sdk.io.hdfs.HadoopFileSystemTest.testRename
> org.apache.beam.sdk.io.hdfs.HadoopResourceIdTest.testGetFilename
> org.apache.beam.sdk.io.hdfs.HadoopResourceIdTest.testResourceIdTester
> {noformat}
> The deprecated
> [Futures.addCallback|https://guava.dev/releases/25.1-jre/api/docs/com/google/common/util/concurrent/Futures.html]
> has been removed since 26.0.
> and another error due to Guava version:
> {noformat}
> java.lang.RuntimeException: java.util.concurrent.ExecutionException:
> java.lang.NoSuchFieldError: DIGIT
> at
> org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:442)
> at
> org.apache.cassandra.db.SystemKeyspace.forceBlockingFlush(SystemKeyspace.java:829)
> at
> org.apache.cassandra.db.SystemKeyspace.removeTruncationRecord(SystemKeyspace.java:668)
> at
> org.apache.cassandra.db.ColumnFamilyStore.invalidate(ColumnFamilyStore.java:568)
> at
> org.apache.cassandra.db.ColumnFamilyStore.invalidate(ColumnFamilyStore.java:544)
> at
> org.apache.cassandra.schema.LegacySchemaMigrator.lambda$unloadLegacySchemaTables$1(LegacySchemaMigrator.java:137)
> at
> com.google.common.collect.ImmutableList.forEach(ImmutableList.java:406)
> at
> org.apache.cassandra.schema.LegacySchemaMigrator.unloadLegacySchemaTables(LegacySchemaMigrator.java:137)
> at
> org.apache.cassandra.schema.LegacySchemaMigrator.migrate(LegacySchemaMigrator.java:83)
> at
> org.apache.cassandra.service.CassandraDaemon.setup(CassandraDaemon.java:252)
> at
> org.apache.cassandra.service.CassandraDaemon.init(CassandraDaemon.java:513)
> at
> org.apache.cassandra.service.EmbeddedCassandraService.start(EmbeddedCassandraService.java:51)
> at
> org.apache.beam.sdk.io.hadoop.format.HadoopFormatIOCassandraTest.beforeClass(HadoopFormatIOCassandraTest.java:192)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> {noformat}
> This error appear in this test in sdks/java/io/hadoop-format module:
> {noformat}
> org.apache.beam.sdk.io.hadoop.format.HadoopFormatIOCassandraTest.classMethod
> {noformat}
> The build (master) fails in my machine:
> {noformat}
> suztomo@suztomo:~/beam$ ./gradlew :sdks:java:io:cassandra:test
> Configuration on demand is an incubating feature.
> > Task :sdks:java:io:cassandra:test
> #
> # A fatal error has been detected by the Java Runtime Environment:
> #
> # SIGSEGV (0xb) at pc=0x00007fbdbc875a3f, pid=3453267, tid=0x000000000034b177
> #
> # JRE version: OpenJDK Runtime Environment (8.0_181) (build
> 1.8.0_181-google-v7-341329124-341329124)
> # Java VM: OpenJDK 64-Bit Server VM (25.181-b01 mixed mode linux-amd64
> compressed oops)
> # Problematic frame:
> # C [libc.so.6+0xbaa3f] __gettimeofday+0x7f
> #
> # Failed to write core dump. Core dumps have been disabled. To enable core
> dumping, try "ulimit -c unlimited" before starting Java again
> ...
> {noformat}
> {{:sdks:java:io:cassandra:test}} works in my MacBook Pro. Other tests in
> {{:sdks:java:io}} passed in Linux.
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