Mark Norkin created BEAM-7047:
---------------------------------

             Summary: Direct Runner loses checkpoint marks when committing 
offsets to Apache Kafka partitions using KafkaIO
                 Key: BEAM-7047
                 URL: https://issues.apache.org/jira/browse/BEAM-7047
             Project: Beam
          Issue Type: Bug
          Components: io-java-kafka, runner-direct
    Affects Versions: 2.9.0
            Reporter: Mark Norkin


On our project we are using Apache Kafka as a source for most of our Apache 
Beam pipelines.

We would like to leverage manual offset commit functionality implemented by 
KafkaIO, and enabled by _commitOffsetsInFinalize_ option.

We also written several tests that sort of represent and document this 
functionality, and should run during our CI process using Direct Runner.

However we experienced issues during tests implementation, particularly we see 
that on Direct Runner  not all checkpoint marks which in case of KafkaIO 
represent partition offsets are committed.

I've created sample 
[project|[https://github.com/marknorkin/beam-direct-runner-not-finalize-all-kafka-offsets]]
 to showcase the issue. 

The result of this test execution is *_not_* deterministic, when failing the 
exemplary stacktrace is as follows:
{code:java}
org.awaitility.core.ConditionTimeoutException: Condition with alias 'sent raw 
messages are read and offsets are committed' didn't complete within 3 minutes 
because lambda expression in 
com.marknorkin.beam.directrunner.sample.ParserEndToEndFlowCommitOffsetsTest: 
expected <{raw_topic-0=10, raw_topic-1=10, raw_topic-2=10}> but was 
<{raw_topic-1=10, raw_topic-0=10}>.

        at org.awaitility.core.ConditionAwaiter.await(ConditionAwaiter.java:145)
        at 
org.awaitility.core.AbstractHamcrestCondition.await(AbstractHamcrestCondition.java:89)
        at org.awaitility.core.ConditionFactory.until(ConditionFactory.java:902)
        at org.awaitility.core.ConditionFactory.until(ConditionFactory.java:645)
        at 
com.marknorkin.beam.directrunner.sample.ParserEndToEndFlowCommitOffsetsTest.shouldTestOffsetCommit(ParserEndToEndFlowCommitOffsetsTest.java:138)
{code}
 

This issue is probably not specific to KafkaIO, as it Direct Runner when 
finalizing Checkpoint Marks works within general CheckpointMark interface.



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