[jira] [Work logged] (BEAM-9468) Add Google Cloud Healthcare API IO Connectors

Tue, 19 May 2020 20:03:20 -0700 


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https://issues.apache.org/jira/browse/BEAM-9468?focusedWorklogId=435323&page=com.atlassian.jira.plugin.system.issuetabpanels:worklog-tabpanel#worklog-435323
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ASF GitHub Bot logged work on BEAM-9468:
----------------------------------------

                Author: ASF GitHub Bot
            Created on: 20/May/20 03:02
            Start Date: 20/May/20 03:02
    Worklog Time Spent: 10m 
      Work Description: jaketf edited a comment on pull request #11339:
URL: https://github.com/apache/beam/pull/11339#issuecomment-631203002


   The issue with FhirIOReadIT seems to be some misuse of 
[TestPubsubSignal](https://beam.apache.org/releases/javadoc/2.20.0/org/apache/beam/sdk/io/gcp/pubsub/TestPubsubSignal.html)
   [Example 
Job](https://pantheon.corp.google.com/dataflow/jobs/us-central1/2020-05-19_19_05_19-1057064265214622054?project=apache-beam-testing)
 clearly has elements added to the "waitForAnyMessage" task
   but the success signal never gets published to the results topic.
   
   Notably there are [warnings in shuffle 
logs](https://pantheon.corp.google.com/logs/viewer?dateRangeEnd=2020-05-20T02:18:25.642Z&dateRangeStart=2020-05-20T02:05:21.347Z&expandAll=false&interval=CUSTOM&project=apache-beam-testing&resource=dataflow_step%2Fjob_id%2F2020-05-19_19_05_19-1057064265214622054&timestamp=2020-05-20T02:57:46.187000000Z&logName=projects%2Fapache-beam-testing%2Flogs%2Fdataflow.googleapis.com%252Fshuffler&minLogLevel=0&customFacets=&limitCustomFacetWidth=true&scrollTimestamp=2020-05-20T02:15:27.999165390Z)
 which warns:
   ```
   "Update range task returned 'invalid argument'. Assuming lost lease for work 
with id 5061980071068333770 (expiration time: 1589940982000, now: 
1589940923590, full status: INVALID_ARGUMENT: Http(400) Bad Request). For more 
information, see https://cloud.google.com/dataflow/docs/guides/common-errors."; 
   ```
   the 
[docs](https://cloud.google.com/dataflow/docs/guides/common-errors#bad-request-shuffler-logs)
 say this can be ignored but smells suspicious here.
   
   
   This is orthogonal to the behavior being tested. Investigating other means 
of performing this test.


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Issue Time Tracking
-------------------

    Worklog Id:     (was: 435323)
    Time Spent: 47h 40m  (was: 47.5h)

> Add Google Cloud Healthcare API IO Connectors
> ---------------------------------------------
>
>                 Key: BEAM-9468
>                 URL: https://issues.apache.org/jira/browse/BEAM-9468
>             Project: Beam
>          Issue Type: New Feature
>          Components: io-java-gcp
>            Reporter: Jacob Ferriero
>            Assignee: Jacob Ferriero
>            Priority: P3
>          Time Spent: 47h 40m
>  Remaining Estimate: 0h
>
> Add IO Transforms for the HL7v2, FHIR and DICOM stores in the [Google Cloud 
> Healthcare API|https://cloud.google.com/healthcare/docs/]
> HL7v2IO
> FHIRIO
> DICOM 



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