Victoria Markman created DRILL-3705:
---------------------------------------
Summary: Query runs out of memory, reported as FAILED and leaves
thread running
Key: DRILL-3705
URL: https://issues.apache.org/jira/browse/DRILL-3705
Project: Apache Drill
Issue Type: Bug
Components: Execution - Flow
Affects Versions: 1.2.0
Reporter: Victoria Markman
Assignee: Chris Westin
Single node drill installation
DRILL_MAX_DIRECT_MEMORY="2G"
DRILL_HEAP="1G"
Execute tpcds query 15 SF100 (parquet) with the settings above. Reproduces 2
out of 3 times.
{code}
SELECT ca.ca_zip,
Sum(cs.cs_sales_price)
FROM catalog_sales cs,
customer c,
customer_address ca,
date_dim dd
WHERE cs.cs_bill_customer_sk = c.c_customer_sk
AND c.c_current_addr_sk = ca.ca_address_sk
AND ( Substr(ca.ca_zip, 1, 5) IN ( '85669', '86197', '88274', '83405',
'86475', '85392', '85460', '80348',
'81792' )
OR ca.ca_state IN ( 'CA', 'WA', 'GA' )
OR cs.cs_sales_price > 500 )
AND cs.cs_sold_date_sk = dd.d_date_sk
AND dd.d_qoy = 1
AND dd.d_year = 1998
GROUP BY ca.ca_zip
ORDER BY ca.ca_zip
LIMIT 100;
{code}
Query runs out of memory, but leaves thread behind even though it is reported
as FAILED (expected result)
Snippet from jstack:
{code}
"2a2451ec-09d8-9f26-e856-5fd349ae72fd:frag:4:0" daemon prio=10
tid=0x00007f5074140000 nid=0x3000 waiting on condition [0x00007f5055b66000]
java.lang.Thread.State: WAITING (parking)
at sun.misc.Unsafe.park(Native Method)
- parking to wait for <0x00000000c012b038> (a
java.util.concurrent.Semaphore$NonfairSync)
at java.util.concurrent.locks.LockSupport.park(LockSupport.java:186)
at
java.util.concurrent.locks.AbstractQueuedSynchronizer.parkAndCheckInterrupt(AbstractQueuedSynchronizer.java:834)
at
java.util.concurrent.locks.AbstractQueuedSynchronizer.doAcquireSharedInterruptibly(AbstractQueuedSynchronizer.java:994)
at
java.util.concurrent.locks.AbstractQueuedSynchronizer.acquireSharedInterruptibly(AbstractQueuedSynchronizer.java:1303)
at java.util.concurrent.Semaphore.acquire(Semaphore.java:472)
at
org.apache.drill.exec.ops.SendingAccountor.waitForSendComplete(SendingAccountor.java:48)
- locked <0x00000000c012b068> (a
org.apache.drill.exec.ops.SendingAccountor)
at
org.apache.drill.exec.ops.FragmentContext.waitForSendComplete(FragmentContext.java:436)
at
org.apache.drill.exec.physical.impl.BaseRootExec.close(BaseRootExec.java:112)
at
org.apache.drill.exec.work.fragment.FragmentExecutor.closeOutResources(FragmentExecutor.java:341)
at
org.apache.drill.exec.work.fragment.FragmentExecutor.cleanup(FragmentExecutor.java:173)
at
org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:292)
at
org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:745)
{code}
NPE in drillbit.log:
{code}
2015-08-24 23:52:04,486 [BitServer-5] ERROR o.a.d.exec.rpc.RpcExceptionHandler
- Exception in RPC communication. Connection: /10.10.88.133:31012 <-->
/10.10.88.133:52417 (data server). Closing connection.
io.netty.handler.codec.DecoderException: java.lang.NullPointerException
at
io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:99)
[netty-codec-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:339)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:324)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.handler.timeout.ReadTimeoutHandler.channelRead(ReadTimeoutHandler.java:150)
[netty-handler-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:339)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:324)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:103)
[netty-codec-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:339)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:324)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.handler.codec.ByteToMessageDecoder.channelRead(ByteToMessageDecoder.java:242)
[netty-codec-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:339)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:324)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.ChannelInboundHandlerAdapter.channelRead(ChannelInboundHandlerAdapter.java:86)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:339)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:324)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:847)
[netty-transport-4.0.27.Final.jar:4.0.27.Final]
at
io.netty.channel.epoll.AbstractEpollStreamChannel$EpollStreamUnsafe.epollInReady(AbstractEpollStreamChannel.java:618)
[netty-transport-native-epoll-4.0.27.Final-linux-x86_64.jar:na]
at
io.netty.channel.epoll.EpollEventLoop.processReady(EpollEventLoop.java:329)
[netty-transport-native-epoll-4.0.27.Final-linux-x86_64.jar:na]
at io.netty.channel.epoll.EpollEventLoop.run(EpollEventLoop.java:250)
[netty-transport-native-epoll-4.0.27.Final-linux-x86_64.jar:na]
at
io.netty.util.concurrent.SingleThreadEventExecutor$2.run(SingleThreadEventExecutor.java:111)
[netty-common-4.0.27.Final.jar:4.0.27.Final]
at java.lang.Thread.run(Thread.java:745) [na:1.7.0_71]
Caused by: java.lang.NullPointerException: null
at
org.apache.drill.exec.work.batch.UnlimitedRawBatchBuffer$UnlimitedBufferQueue.checkForOutOfMemory(UnlimitedRawBatchBuffer.java:68)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at
org.apache.drill.exec.work.batch.BaseRawBatchBuffer.handleOutOfMemory(BaseRawBatchBuffer.java:95)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at
org.apache.drill.exec.work.batch.BaseRawBatchBuffer.enqueue(BaseRawBatchBuffer.java:83)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at
org.apache.drill.exec.work.batch.AbstractDataCollector.batchArrived(AbstractDataCollector.java:105)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at
org.apache.drill.exec.work.batch.IncomingBuffers.batchArrived(IncomingBuffers.java:75)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at
org.apache.drill.exec.work.fragment.NonRootFragmentManager.handle(NonRootFragmentManager.java:73)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at
org.apache.drill.exec.rpc.data.DataResponseHandlerImpl.handle(DataResponseHandlerImpl.java:48)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at org.apache.drill.exec.rpc.data.DataServer.send(DataServer.java:176)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at
org.apache.drill.exec.rpc.data.DataServer.handle(DataServer.java:142)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at org.apache.drill.exec.rpc.data.DataServer.handle(DataServer.java:51)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at
org.apache.drill.exec.rpc.RpcBus$InboundHandler.decode(RpcBus.java:233)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at
org.apache.drill.exec.rpc.RpcBus$InboundHandler.decode(RpcBus.java:205)
~[drill-java-exec-1.2.0-SNAPSHOT.jar:1.2.0-SNAPSHOT]
at
io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:89)
[netty-codec-4.0.27.Final.jar:4.0.27.Final]
... 20 common frames omitted
2015-08-24 23:52:04,489 [BitClient-1] ERROR o.a.d.exec.rpc.RpcExceptionHandler
- Exception in RPC communication. Connection: /10.10.88.133:52417 <-->
/10.10.88.133:31012 (data client). Closing connection.
java.io.IOException: syscall:read(...)() failed: Connection reset by peer
2015-08-24 23:52:04,489 [BitClient-1] INFO o.a.drill.exec.rpc.data.DataClient
- Channel closed /10.10.88.133:52417 <--> /10.10.88.133:31012.
2015-08-24 23:52:04,505 [BitServer-6] ERROR o.a.d.exec.rpc.RpcExceptionHandler
- Exception in RPC communication. Connection: /10.10.88.133:31012 <-->
/10.10.88.133:52418 (data server). Closing connection.
io.netty.handler.codec.DecoderException: java.lang.NullPointerException
{code}
Attached:
drillbit.log
2a2451ec-09d8-9f26-e856-5fd349ae72fd.sys.drill (query profile)
jstack.txt ( stack output for the running drillbit )
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