Robert Metzger created FLINK-6646:
-------------------------------------

             Summary: YARN session doesn't work with HA
                 Key: FLINK-6646
                 URL: https://issues.apache.org/jira/browse/FLINK-6646
             Project: Flink
          Issue Type: Bug
          Components: YARN
    Affects Versions: 1.2.0, 1.3.0
            Reporter: Robert Metzger
            Priority: Critical


While testing Flink 1.3.0 RC1, I ran into the following issue on the JobManager.

{code}
2017-05-19 14:41:38,030 INFO  
org.apache.flink.runtime.webmonitor.JobManagerRetriever       - New leader 
reachable under 
akka.tcp://flink@permanent-qa-cluster-i7c9.c.astral-sorter-757.internal:36528/user/jobmanager:6539dc04-d7fe-4f85-a0b6-09bfb0de8a58.
2017-05-19 14:41:38,033 INFO  org.apache.flink.yarn.YarnFlinkResourceManager    
            - Resource Manager associating with leading JobManager 
Actor[akka://flink/user/jobmanager#1602741108] - leader session 
6539dc04-d7fe-4f85-a0b6-09bfb0de8a58
2017-05-19 14:41:38,033 INFO  org.apache.flink.yarn.YarnFlinkResourceManager    
            - Requesting new TaskManager container with 1024 megabytes memory. 
Pending requests: 1
2017-05-19 14:41:38,781 INFO  org.apache.flink.yarn.YarnFlinkResourceManager    
            - Received new container: container_1494870922226_0061_02_000002 - 
Remaining pending container requests: 0
2017-05-19 14:41:38,782 INFO  org.apache.flink.yarn.YarnFlinkResourceManager    
            - Launching TaskManager in container ContainerInLaunch @ 
1495204898782: Container: [ContainerId: container_1494870922226_0061_02_000002, 
NodeId: permanent-qa-cluster-d3iz.c.astral-sorter-757.internal:8041, 
NodeHttpAddress: permanent-qa-cluster-d3iz.c.astral-sorter-757.internal:8042, 
Resource: <memory:1024, vCores:1>, Priority: 0, Token: Token { kind: 
ContainerToken, service: 10.240.0.32:8041 }, ] on host 
permanent-qa-cluster-d3iz.c.astral-sorter-757.internal
2017-05-19 14:41:38,788 INFO  
org.apache.hadoop.yarn.client.api.impl.ContainerManagementProtocolProxy  - 
Opening proxy : permanent-qa-cluster-d3iz.c.astral-sorter-757.internal:8041
2017-05-19 14:41:44,284 INFO  org.apache.flink.yarn.YarnFlinkResourceManager    
            - Container container_1494870922226_0061_02_000002 failed, with a 
TaskManager in launch or registration. Exit status: -1000
2017-05-19 14:41:44,284 INFO  org.apache.flink.yarn.YarnFlinkResourceManager    
            - Diagnostics for container container_1494870922226_0061_02_000002 
in state COMPLETE : exitStatus=-1000 diagnostics=File does not exist: 
hdfs://nameservice1/user/robert/.flink/application_1494870922226_0061/cf9287fe-ac75-4066-a648-91787d946890-taskmanager-conf.yaml
java.io.FileNotFoundException: File does not exist: 
hdfs://nameservice1/user/robert/.flink/application_1494870922226_0061/cf9287fe-ac75-4066-a648-91787d946890-taskmanager-conf.yaml
        at 
org.apache.hadoop.hdfs.DistributedFileSystem$19.doCall(DistributedFileSystem.java:1219)
        at 
org.apache.hadoop.hdfs.DistributedFileSystem$19.doCall(DistributedFileSystem.java:1211)
        at 
org.apache.hadoop.fs.FileSystemLinkResolver.resolve(FileSystemLinkResolver.java:81)
        at 
org.apache.hadoop.hdfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:1211)
        at org.apache.hadoop.yarn.util.FSDownload.copy(FSDownload.java:251)
        at org.apache.hadoop.yarn.util.FSDownload.access$000(FSDownload.java:61)
        at org.apache.hadoop.yarn.util.FSDownload$2.run(FSDownload.java:359)
        at org.apache.hadoop.yarn.util.FSDownload$2.run(FSDownload.java:357)
        at java.security.AccessController.doPrivileged(Native Method)
        at javax.security.auth.Subject.doAs(Subject.java:415)
        at 
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1698)
        at org.apache.hadoop.yarn.util.FSDownload.call(FSDownload.java:356)
        at org.apache.hadoop.yarn.util.FSDownload.call(FSDownload.java:60)
        at java.util.concurrent.FutureTask.run(FutureTask.java:262)
        at 
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
        at java.util.concurrent.FutureTask.run(FutureTask.java:262)
        at 
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
        at 
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
        at java.lang.Thread.run(Thread.java:745)
{code}

The problem is the following:
- JobManager1 starts from a yarn-session.sh
- Job1 gets submitted to JobManager1
- JobManager1 dies
- YARN starts a new JM: JobManager2
- in the meantime, errors on the yarn-session.sh appear, shutting down the 
session. This includes deleting the yarn staging directory in HDFS.
- JobManager2 is unable to start a new Taskmanager because files in staging got 
deleted by the client.



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