liupc opened a new pull request #9703: [FLINK-14038]Add default GC options for flink on yarn to facilitate debugging URL: https://github.com/apache/flink/pull/9703 ## What is the purpose of the change When long full gc or oom happen in flink applications running on yarn, there are no good ways to debugging or check the reason. mostly we just got an timeout exceptions like: ``` java.lang.IllegalStateException: Update task on TaskManager container_e860_1567429198842_571077_01_000006 @ zjy-hadoop-prc-st320.bj (dataPort=50990) failed due to: at org.apache.flink.runtime.executiongraph.Execution.lambda$sendUpdatePartitionInfoRpcCall$14(Execution.java:1395) at java.util.concurrent.CompletableFuture.uniWhenComplete(CompletableFuture.java:760) at java.util.concurrent.CompletableFuture$UniWhenComplete.tryFire(CompletableFuture.java:736) at java.util.concurrent.CompletableFuture$Completion.run(CompletableFuture.java:442) at org.apache.flink.runtime.rpc.akka.AkkaRpcActor.handleRunAsync(AkkaRpcActor.java:397) at org.apache.flink.runtime.rpc.akka.AkkaRpcActor.handleRpcMessage(AkkaRpcActor.java:190) at org.apache.flink.runtime.rpc.akka.FencedAkkaRpcActor.handleRpcMessage(FencedAkkaRpcActor.java:74) at org.apache.flink.runtime.rpc.akka.AkkaRpcActor.handleMessage(AkkaRpcActor.java:152) at akka.japi.pf.UnitCaseStatement.apply(CaseStatements.scala:26) at akka.japi.pf.UnitCaseStatement.apply(CaseStatements.scala:21) at scala.PartialFunction$class.applyOrElse(PartialFunction.scala:123) at akka.japi.pf.UnitCaseStatement.applyOrElse(CaseStatements.scala:21) at scala.PartialFunction$OrElse.applyOrElse(PartialFunction.scala:170) at scala.PartialFunction$OrElse.applyOrElse(PartialFunction.scala:171) at scala.PartialFunction$OrElse.applyOrElse(PartialFunction.scala:171) at akka.actor.Actor$class.aroundReceive(Actor.scala:517) at akka.actor.AbstractActor.aroundReceive(AbstractActor.scala:225) at akka.actor.ActorCell.receiveMessage(ActorCell.scala:592) at akka.actor.ActorCell.invoke(ActorCell.scala:561) at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:258) at akka.dispatch.Mailbox.run(Mailbox.scala:225) at akka.dispatch.Mailbox.exec(Mailbox.scala:235) at akka.dispatch.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260) at akka.dispatch.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339) at akka.dispatch.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979) at akka.dispatch.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107) Caused by: java.util.concurrent.CompletionException: akka.pattern.AskTimeoutException: Ask timed out on [Actor[akka.tcp://[email protected]:62051/user/taskmanager_0#-171547157]] after [10000 ms]. Message of type [org.apache.flink.runtime.rpc.messages.RemoteRpcInvocation]. A typical reason for `AskTimeoutException` is that the recipient actor didn't send a reply. at java.util.concurrent.CompletableFuture.encodeThrowable(CompletableFuture.java:292) at java.util.concurrent.CompletableFuture.completeThrowable(CompletableFuture.java:308) at java.util.concurrent.CompletableFuture.uniApply(CompletableFuture.java:593) at java.util.concurrent.CompletableFuture$UniApply.tryFire(CompletableFuture.java:577) at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:474) at java.util.concurrent.CompletableFuture.completeExceptionally(CompletableFuture.java:1977) at org.apache.flink.runtime.concurrent.FutureUtils$1.onComplete(FutureUtils.java:871) at akka.dispatch.OnComplete.internal(Future.scala:263) at akka.dispatch.OnComplete.internal(Future.scala:261) at akka.dispatch.japi$CallbackBridge.apply(Future.scala:191) at akka.dispatch.japi$CallbackBridge.apply(Future.scala:188) at scala.concurrent.impl.CallbackRunnable.run(Promise.scala:36) at org.apache.flink.runtime.concurrent.Executors$DirectExecutionContext.execute(Executors.java:74) at scala.concurrent.impl.CallbackRunnable.executeWithValue(Promise.scala:44) at scala.concurrent.impl.Promise$DefaultPromise.tryComplete(Promise.scala:252) at akka.pattern.PromiseActorRef$$anonfun$1.apply$mcV$sp(AskSupport.scala:644) at akka.actor.Scheduler$$anon$4.run(Scheduler.scala:205) at scala.concurrent.Future$InternalCallbackExecutor$.unbatchedExecute(Future.scala:601) at scala.concurrent.BatchingExecutor$class.execute(BatchingExecutor.scala:109) at scala.concurrent.Future$InternalCallbackExecutor$.execute(Future.scala:599) at akka.actor.LightArrayRevolverScheduler$TaskHolder.executeTask(LightArrayRevolverScheduler.scala:328) at akka.actor.LightArrayRevolverScheduler$$anon$4.executeBucket$1(LightArrayRevolverScheduler.scala:279) at akka.actor.LightArrayRevolverScheduler$$anon$4.nextTick(LightArrayRevolverScheduler.scala:283) at akka.actor.LightArrayRevolverScheduler$$anon$4.run(LightArrayRevolverScheduler.scala:235) at java.lang.Thread.run(Thread.java:748) Caused by: akka.pattern.AskTimeoutException: Ask timed out on [Actor[akka.tcp://[email protected]:62051/user/taskmanager_0#-171547157]] after [10000 ms]. Message of type [org.apache.flink.runtime.rpc.messages.RemoteRpcInvocation]. A typical reason for `AskTimeoutException` is that the recipient actor didn't send a reply. at akka.pattern.PromiseActorRef$$anonfun$2.apply(AskSupport.scala:635) at akka.pattern.PromiseActorRef$$anonfun$2.apply(AskSupport.scala:635) at akka.pattern.PromiseActorRef$$anonfun$1.apply$mcV$sp(AskSupport.scala:648) ... 9 more ``` This PR is trying to add default GC options, and thus to facillitate debugging such issues. ## Brief change log - Add default GC options when depolying application on yarn. ## Verifying this change This change is already covered by existing tests, such as *(please describe tests)*. This change added tests and can be verified as follows: - slightly modified the YarnClusterDescriptorTest and BootstrapToolsTest, and passed - Manually tested on real yarn cluster ## Does this pull request potentially affect one of the following parts: - Dependencies (does it add or upgrade a dependency): (no) - The public API, i.e., is any changed class annotated with `@Public(Evolving)`: (no) - The serializers: ( no ) - The runtime per-record code paths (performance sensitive): ( no) - Anything that affects deployment or recovery: JobManager (and its components), Checkpointing, Yarn/Mesos, ZooKeeper: (no ) - The S3 file system connector: (no) ## Documentation - Does this pull request introduce a new feature? ( no) - If yes, how is the feature documented? (not applicable)
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