Sachin Goel created FLINK-5410:
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Summary: Running out of memory on Yarn
Key: FLINK-5410
URL: https://issues.apache.org/jira/browse/FLINK-5410
Project: Flink
Issue Type: Bug
Components: YARN
Reporter: Sachin Goel
I'm running locally under this configuration(copied from nodemanager logs):
physical-memory=8192 virtual-memory=17204 virtual-cores=8
Before starting a flink deployment, memory usage stats show 3.7 GB used on
system, indicating lots of free memory for flink containers.
However, after I submit using minimal resource requirements, ./yarn-session.sh
-n 1 -tm 768, the cluster deploys successfully but then every application on
system receives a sigterm and it basically kills the current user session,
logging out of the system.
The job manager and task manager logs contain just the information that a
SIGTERM was received and shut down gracefully.
All yarn and dfs process contain the log information showing the receipt of a
sigterm.
Here's the relevant log from nodemanager:
{code}
org.apache.hadoop.yarn.server.nodemanager.containermanager.monitor.ContainersMonitorImpl:
Starting resource-monitoring for container_1483603191971_0002_01_000002
2017-01-05 17:00:08,744 INFO
org.apache.hadoop.yarn.server.nodemanager.containermanager.monitor.ContainersMonitorImpl:
Memory usage of ProcessTree 17872 for container-id
container_1483603191971_0002_01_000001: 282.7 MB of 1 GB physical memory used;
2.1 GB of 2.1 GB virtual memory used
2017-01-05 17:00:08,744 WARN
org.apache.hadoop.yarn.server.nodemanager.containermanager.monitor.ContainersMonitorImpl:
Process tree for container: container_1483603191971_0002_01_000001 has
processes older than 1 iteration running over the configured limit.
Limit=2254857728, current usage = 2255896576
2017-01-05 17:00:08,745 WARN
org.apache.hadoop.yarn.server.nodemanager.containermanager.monitor.ContainersMonitorImpl:
Container [pid=17872,containerID=container_1483603191971_0002_01_000001] is
running beyond virtual memory limits. Current usage: 282.7 MB of 1 GB physical
memory used; 2.1 GB of 2.1 GB virtual memory used. Killing container.
Dump of the process-tree for container_1483603191971_0002_01_000001 :
|- PID PPID PGRPID SESSID CMD_NAME USER_MODE_TIME(MILLIS)
SYSTEM_TIME(MILLIS) VMEM_USAGE(BYTES) RSSMEM_USAGE(PAGES) FULL_CMD_LINE
|- 17872 17870 17872 17872 (bash) 0 0 21409792 812 /bin/bash -c
/usr/lib/jvm/java-8-openjdk-amd64//bin/java -Xmx424M
-Dlog.file=/opt/hadoop-2.7.3/logs/userlogs/application_1483603191971_0002/container_1483603191971_0002_01_000001/jobmanager.log
-Dlogback.configurationFile=file:logback.xml
-Dlog4j.configuration=file:log4j.properties
org.apache.flink.yarn.YarnApplicationMasterRunner
1>/opt/hadoop-2.7.3/logs/userlogs/application_1483603191971_0002/container_1483603191971_0002_01_000001/jobmanager.out
2>/opt/hadoop-2.7.3/logs/userlogs/application_1483603191971_0002/container_1483603191971_0002_01_000001/jobmanager.err
|- 17879 17872 17872 17872 (java) 748 20 2234486784 71553
/usr/lib/jvm/java-8-openjdk-amd64//bin/java -Xmx424M
-Dlog.file=/opt/hadoop-2.7.3/logs/userlogs/application_1483603191971_0002/container_1483603191971_0002_01_000001/jobmanager.log
-Dlogback.configurationFile=file:logback.xml
-Dlog4j.configuration=file:log4j.properties
org.apache.flink.yarn.YarnApplicationMasterRunner
2017-01-05 17:00:08,745 INFO
org.apache.hadoop.yarn.server.nodemanager.containermanager.monitor.ContainersMonitorImpl:
Removed ProcessTree with root 17872
2017-01-05 17:00:08,746 INFO
org.apache.hadoop.yarn.server.nodemanager.containermanager.container.ContainerImpl:
Container container_1483603191971_0002_01_000001 transitioned from RUNNING to
KILLING
2017-01-05 17:00:08,746 INFO
org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch:
Cleaning up container container_1483603191971_0002_01_000001
2017-01-05 17:00:08,779 ERROR
org.apache.hadoop.yarn.server.nodemanager.NodeManager: RECEIVED SIGNAL 15:
SIGTERM
2017-01-05 17:00:08,822 WARN
org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor: Exit code
from container container_1483603191971_0002_01_000001 is : 143
{code}
Is the memory available on my pc not enough or are there any known issues which
might lead to this?
Also, this doesn't occur every time I start a flink session.
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