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https://issues.apache.org/jira/browse/HBASE-2770?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12928009#action_12928009
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stack commented on HBASE-2770:
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Will I close this Dave?

> Major compactions from shell may not major compact all families
> ---------------------------------------------------------------
>
>                 Key: HBASE-2770
>                 URL: https://issues.apache.org/jira/browse/HBASE-2770
>             Project: HBase
>          Issue Type: Bug
>    Affects Versions: 0.20.4
>            Reporter: Dave Latham
>            Priority: Critical
>             Fix For: 0.92.0
>
>
> As part of a data center migration, I initiated a major_compaction request on 
> all tables from the shell.  A few hours later, all the region servers in the 
> cluster appeared to have completed the compactions and all compactionQueue 
> metrics were back to 0.  However, some column families of some regions had 
> not actually done a major compaction.
> Digging through logs and code, it looks like the following happened.  The 
> shell makes a major compaction request which sets 
> HRegion.forceMajorCompaction to true for every region.  Periodically, the 
> HRegionServer.MajorCompactionChecker checks to see if a major compaction is 
> needed in any family's store.  If so, calls 
> CompactSplitThread.compactionRequested which ends up setting the region 
> forceMajorCompaction to false, even if it is already in the compaction queue 
> and set to true.  Then, when that region comes off the queue to be compacted, 
> each family/store separately checks for whether it should do a major 
> compaction, so some families may not do so.
> (This is not good if, for example, you're doing a DistCp of the hbase dir and 
> later on the cluster decides to do a compaction on those files and deletes 
> ones the DistCp job is looking for, causing it to fail.)

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