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https://issues.apache.org/jira/browse/HBASE-1521?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14311828#comment-14311828
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Lars Hofhansl commented on HBASE-1521:
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Is this still relevant? We do treat deletes in minor compactions (we delete any 
Cell that is affected by a delete). Delete markers themselves are only removed 
during major compactions.

Seems we can close this 5 year old issue.

> Optimize codepath for minor compactions
> ---------------------------------------
>
>                 Key: HBASE-1521
>                 URL: https://issues.apache.org/jira/browse/HBASE-1521
>             Project: HBase
>          Issue Type: Improvement
>    Affects Versions: 0.20.0, 0.90.0
>            Reporter: Jonathan Gray
>            Assignee: Amitanand Aiyer
>
> There are some additional optimizations in the specialized StoreScanner and 
> also in HFile for minor compactions.  For example, there is some KV 
> disassembling and sanity checking in HFile even though in a minor compaction 
> these checks have already been run during the flush.
> Another area to discuss is whether we should actually process deletes during 
> minor compactions.  It's not especially expensive (ScanDeleteTracker is quite 
> simple) but it requires looking at both the row and the qualifier value of 
> every single KV.  Removing this would drop our axiom that "Deletes only apply 
> to later storefiles", which is used during Get processing to have more 
> efficient delete handling.



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