Jerry He created HBASE-16647:

             Summary: hbck should do the offline reference repair before online 
                 Key: HBASE-16647
             Project: HBase
          Issue Type: Bug
            Reporter: Jerry He
            Assignee: Jerry He

-fixReferenceFiles  Try to offline lingering reference store files

Metadata Repair shortcuts
-repair    Shortcut for -fixAssignments -fixMeta -fixHdfsHoles -fixHdfsOrphans 
-fixHdfsOverlaps -fixVersionFile -sidelineBigOverlaps -fixReferenceFiles 
-fixTableLocks -fixOrphanedTableZnodes

Bad reference files prevent the region from coming online.
If used in the shortcut combination, the reference files should be fixed before 
other online fix.

I have seen repeated '-repair' did not work because bad reference files failed 

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