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https://issues.apache.org/jira/browse/HBASE-18771?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16156849#comment-16156849
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ramkrishna.s.vasudevan commented on HBASE-18771:
------------------------------------------------

Thanks [~abhishek.chouhan]. I had been trying hard to reproduce this case based 
on HBASE-18186 but with no success because I was not able to get the actual 
case and there were no actual logs to trace it out except for the ones in the 
JIRA description. 
bq.Now before the files are archived we get a FNFE in a scanner. 
Why is this happening? If you can tell me how this is happening then I can 
think the rest makes sense. Because when any scanner is ongoing we are not 
updating the store files nor we are creating a new scanner from the files that 
were compacted.
Also https://issues.apache.org/jira/browse/HBASE-17712 this seems not in 1.3. 

> Incorrect StoreFileRefresh leading to split and compaction failures
> -------------------------------------------------------------------
>
>                 Key: HBASE-18771
>                 URL: https://issues.apache.org/jira/browse/HBASE-18771
>             Project: HBase
>          Issue Type: Bug
>    Affects Versions: 1.3.1
>            Reporter: Abhishek Singh Chouhan
>            Assignee: Abhishek Singh Chouhan
>            Priority: Blocker
>             Fix For: 3.0.0, 1.4.0, 1.3.2, 1.5.0, 2.0.0-alpha-3
>
>         Attachments: HBASE-18771.branch-1.3.001.patch, 
> HBASE-18771.branch-1.3.002.patch
>
>
> We ran into issues of compaction and split failures with 1.3 similar to 
> HBASE-18186 and HBASE-17406. Here's what i believe is happening -
> Lets say we have 4 store files that are compacted to form a new one. At this 
> point we now have 5 store files, however only 1(the newly formed) is open now 
> for the store and rest are waiting to get archived by HFileArchiver
> Now before the files are archived we get a FNFE in a scanner. This results in 
> HRegion.RegionScannerImpl.handleFileNotFound(FileNotFoundException fnfe) 
> being called which results in region.refreshStoreFiles(true) -> 
> HStore.refreshStoreFiles()
> HStore.refreshStoreFiles now checks the hdfs dir and adds the previously 
> compacted files back to the store, however these files are also present in 
> StoreFileManager's compactedFiles list. Now at this point HFileArchiver runs, 
> checks compactedFiles list and moves these files into the archive directory. 
> Now when compaction runs it gets:
> 2017-09-04 12:30:13,899 ERROR [ctions-1504505399609] 
> regionserver.CompactSplitThread - Compaction selection failed regionName = 
> xxxx, storeName = 0, priority = 26, time = 1504528213899
> java.io.FileNotFoundException: File does not exist: hdfs://xxxx
>         at 
> org.apache.hadoop.hdfs.DistributedFileSystem$23.doCall(DistributedFileSystem.java:1337)
>         at 
> org.apache.hadoop.hdfs.DistributedFileSystem$23.doCall(DistributedFileSystem.java:1329)
>         at 
> org.apache.hadoop.fs.FileSystemLinkResolver.resolve(FileSystemLinkResolver.java:81)
>         at 
> org.apache.hadoop.hdfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:1329)
>         at 
> org.apache.hadoop.fs.FilterFileSystem.getFileStatus(FilterFileSystem.java:422)
>         at 
> org.apache.hadoop.hbase.regionserver.StoreFileInfo.getReferencedFileStatus(StoreFileInfo.java:342)
>         at 
> org.apache.hadoop.hbase.regionserver.StoreFileInfo.getFileStatus(StoreFileInfo.java:355)
>         at 
> org.apache.hadoop.hbase.regionserver.StoreFileInfo.getModificationTime(StoreFileInfo.java:360)
>         at 
> org.apache.hadoop.hbase.regionserver.StoreFile.getModificationTimeStamp(StoreFile.java:325)
>         at 
> org.apache.hadoop.hbase.regionserver.StoreUtils.getLowestTimestamp(StoreUtils.java:63)
>         at 
> org.apache.hadoop.hbase.regionserver.compactions.RatioBasedCompactionPolicy.shouldPerformMajorCompaction(RatioBasedCompactionPolicy.java:65)
>         at 
> org.apache.hadoop.hbase.regionserver.compactions.SortedCompactionPolicy.selectCompaction(SortedCompactionPolicy.java:82)
>         at 
> org.apache.hadoop.hbase.regionserver.DefaultStoreEngine$DefaultCompactionContext.select(DefaultStoreEngine.java:107)
>         at 
> org.apache.hadoop.hbase.regionserver.HStore.requestCompaction(HStore.java:1679)
> Similarly if a split happens after archival we fail after PONR while opening 
> daughter regions due to FNFE. This results in parent offline and daughters 
> also in a limbo since they're unable to open. Since we get the error after 
> PONR we also end up aborting the RS.



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