busbey commented on a change in pull request #3: Hbase 22567
URL: https://github.com/apache/hbase-operator-tools/pull/3#discussion_r303512425
 
 

 ##########
 File path: hbase-hbck2/src/main/java/org/apache/hbase/HBCK2.java
 ##########
 @@ -164,6 +178,99 @@ int setRegionState(String region, RegionState.State 
newState)
     return EXIT_FAILURE;
   }
 
+  Map<TableName,List<Path>> reportTablesWithMissingRegionsInMeta(String... 
nameSpaceOrTable)
+      throws Exception {
+    Map<TableName,List<Path>> report;
+    try(final MetaFixer metaFixer = new MetaFixer(this.conf)){
+      List<String> names = nameSpaceOrTable != null ? 
Arrays.asList(nameSpaceOrTable) : null;
+      report = metaFixer.reportTablesMissingRegions(names);
+    } catch (Exception e) {
+      LOG.error("Error reporting missing regions: ", e);
+      throw e;
+    }
+    if(LOG.isDebugEnabled()) {
+      LOG.debug(formatMissingRegionsInMetaReport(report));
+    }
+    return report;
+  }
+
+  List<String> addMissingRegionsInMeta(List<Path> regionsPath) throws 
IOException {
+    List<String> reAddedRegionsEncodedNames = new ArrayList<>();
+    try(final MetaFixer metaFixer = new MetaFixer(this.conf)){
+      for(Path regionPath : regionsPath){
+        metaFixer.putRegionInfoFromHdfsInMeta(regionPath);
+        reAddedRegionsEncodedNames.add(regionPath.getName());
+      }
+    }
+    return reAddedRegionsEncodedNames;
+  }
+
+  Pair<List<String>, List<ExecutionException>> 
addMissingRegionsInMetaForTables(String...
+      nameSpaceOrTable) {
+    ExecutorService executorService = Executors.newFixedThreadPool(
+      nameSpaceOrTable.length > Runtime.getRuntime().availableProcessors() ?
+        Runtime.getRuntime().availableProcessors() : nameSpaceOrTable.length);
+    List<Future<List<String>>> futures = new 
ArrayList<>(nameSpaceOrTable.length);
+    final List<String> readdedRegionNames = new ArrayList<>();
+    List<ExecutionException> executionErrors = new ArrayList<>();
+    try(final MetaFixer metaFixer = new MetaFixer(this.conf)){
+      //reducing number of retries in case disable fails due to namespace 
table region also missing
+      this.conf.setInt(HConstants.HBASE_CLIENT_RETRIES_NUMBER, 1);
+      try(Connection conn = ConnectionFactory.createConnection(this.conf);
+        final Admin admin = conn.getAdmin()) {
+        Map<TableName,List<Path>> report = 
reportTablesWithMissingRegionsInMeta(nameSpaceOrTable);
+        for (TableName tableName : report.keySet()) {
+          if(admin.tableExists(tableName)) {
+            futures.add(executorService.submit(new Callable<List<String>>() {
+              @Override
+              public List<String> call() throws Exception {
+                LOG.debug("running thread for {}", 
tableName.getNameWithNamespaceInclAsString());
+                try {
+                  admin.disableTable(tableName);
+                } catch (IOException e) {
+                  LOG.debug("Failed to disable table {}, "
+                      + "is namespace table also missing regions? Continue 
anyway...",
+                    tableName.getNameWithNamespaceInclAsString(), e);
+                }
+                List<String> reAddedRegions = 
addMissingRegionsInMeta(report.get(tableName));
+                try {
+                  admin.enableTable(tableName);
+                } catch (IOException e) {
+                  LOG.debug("Failed enabling table {}. It might be that 
namespace table "
+                      + "region is also missing.\n"
+                      + "After this command finishes, please make sure on this 
table state.",
+                    tableName.getNameWithNamespaceInclAsString(), e);
+                }
+                return reAddedRegions;
+              }
+            }));
+          } else {
+            LOG.warn("Table {} does not exist! Skipping...",
+              tableName.getNameWithNamespaceInclAsString());
+          }
+        }
+        for(Future<List<String>> f : futures){
+          try {
+            readdedRegionNames.addAll(f.get());
+          } catch (ExecutionException e){
+            //we want to allow potential running threads to finish, so we 
collect execution
 
 Review comment:
   yeah, one of the futures could refuse to be interrupted and then we'd never 
get to the point of the nicely formatted output when we go through the 
executionErrors.

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