[
https://issues.apache.org/jira/browse/MADLIB-1195?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Frank McQuillan reassigned MADLIB-1195:
---------------------------------------
Assignee: Rahul Iyer
> pgxn not installing madlib with postgres 10
> -------------------------------------------
>
> Key: MADLIB-1195
> URL: https://issues.apache.org/jira/browse/MADLIB-1195
> Project: Apache MADlib
> Issue Type: Bug
> Components: Build System
> Reporter: Adam Brusselback
> Assignee: Rahul Iyer
> Fix For: v1.14
>
>
> When attempting to install Madlib 1.13 on Postgres 10 using the pgxn client
> on Debian 9.2, I get a failure during the install.
> {code}
> # pgxn install madlib
> INFO: best version: madlib 1.13.0
> INFO: saving /tmp/tmp71a430/madlib-1.13.0.zip
> INFO: unpacking: /tmp/tmp71a430/madlib-1.13.0.zip
> INFO: running configure
> -- The C compiler identification is GNU 6.3.0
> -- The CXX compiler identification is GNU 6.3.0
> -- Check for working C compiler: /usr/bin/gcc
> -- Check for working C compiler: /usr/bin/gcc -- works
> -- Detecting C compiler ABI info
> -- Detecting C compiler ABI info - done
> -- Detecting C compile features
> -- Detecting C compile features - done
> -- Check for working CXX compiler: /usr/bin/g++
> -- Check for working CXX compiler: /usr/bin/g++ -- works
> -- Detecting CXX compiler ABI info
> -- Detecting CXX compiler ABI info - done
> -- Detecting CXX compile features
> -- Detecting CXX compile features - done
> -- Could NOT find Boost
> -- No sufficiently recent version (>= 1.47) of Boost was found. Will download.
> -- Found PythonInterp: /usr/bin/python (found version "2.7.13")
> -- Found PostgreSQL: /usr/lib/postgresql/10/bin/postgres
> -- Found PostgreSQL_10: /usr/lib/postgresql/10/bin/postgres
> >> Adding PostgreSQL 10.0 (x86_64) to target list...
> -- Could NOT find Greenplum (missing: GREENPLUM_EXECUTABLE)
> -- Could NOT find HAWQ (missing: HAWQ_EXECUTABLE)
> -- Using default web-based MathJax
> -- Could NOT find FLEX (missing: FLEX_EXECUTABLE) (Required is at least
> version "2.5.33")
> -- Could NOT find BISON (missing: BISON_EXECUTABLE) (Required is at least
> version "2.4")
> -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
> -- Could not find recent versions of at least one of flex, bison, doxygen, or
> dot (part of graphviz, needed for doxygen). Documentation will not be built.
> -- A complete LaTeX installation could not be found. Compiling the design
> document will not be possible.
> -- Configuring done
> -- Generating done
> -- Build files have been written to: /tmp/tmp71a430/madlib-1.13.0/build
> INFO: building extension
> make -C build all
> make[1]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
> make[2]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
> make[3]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
> Scanning dependencies of target pythonFiles
> make[3]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
> [ 0%] Built target pythonFiles
> make[3]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
> Scanning dependencies of target EP_eigen
> make[3]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
> make[3]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
> [ 0%] Creating directories for 'EP_eigen'
> [ 0%] Performing download step (download, verify and extract) for 'EP_eigen'
> -- Downloading...
> dst='/tmp/tmp71a430/madlib-1.13.0/build/third_party/downloads/3.2.tar.gz'
> timeout='none'
> -- Using src='https://github.com/madlib/eigen/archive/branches/3.2.tar.gz'
> -- Downloading... done
> -- extracting...
> src='/tmp/tmp71a430/madlib-1.13.0/build/third_party/downloads/3.2.tar.gz'
> dst='/tmp/tmp71a430/madlib-1.13.0/build/third_party/src/EP_eigen'
> -- extracting... [tar xfz]
> -- extracting... [analysis]
> -- extracting... [rename]
> -- extracting... [clean up]
> -- extracting... done
> [ 0%] No patch step for 'EP_eigen'
> [ 0%] No update step for 'EP_eigen'
> [ 0%] Performing configure step for 'EP_eigen'
> Ignored: cmake -GUnix Makefiles
> /tmp/tmp71a430/madlib-1.13.0/build/third_party/src/EP_eigen
> [ 0%] Performing build step for 'EP_eigen'
> Ignored: make
> [ 0%] Performing install step for 'EP_eigen'
> Ignored: make
> [ 1%] Completed 'EP_eigen'
> make[3]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
> [ 1%] Built target EP_eigen
> make[3]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
> Scanning dependencies of target EP_pyxb
> make[3]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
> make[3]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
> [ 1%] Creating directories for 'EP_pyxb'
> [ 1%] Performing download step (download, verify and extract) for 'EP_pyxb'
> -- Downloading...
>
> dst='/tmp/tmp71a430/madlib-1.13.0/build/third_party/downloads/PyXB-1.2.6.tar.gz'
> timeout='none'
> -- Using src='http://sourceforge.net/projects/pyxb/files/PyXB-1.2.6.tar.gz'
> -- [download 100% complete]
> -- [download 0% complete]
> -- [download 1% complete]
> -- [download 2% complete]
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> -- [download 100% complete]
> -- verifying file...
>
> file='/tmp/tmp71a430/madlib-1.13.0/build/third_party/downloads/PyXB-1.2.6.tar.gz'
> -- Downloading... done
> -- extracting...
>
> src='/tmp/tmp71a430/madlib-1.13.0/build/third_party/downloads/PyXB-1.2.6.tar.gz'
> dst='/tmp/tmp71a430/madlib-1.13.0/build/third_party/src/EP_pyxb'
> -- extracting... [tar xfz]
> -- extracting... [analysis]
> -- extracting... [rename]
> -- extracting... [clean up]
> -- extracting... done
> [ 1%] Performing patch step for 'EP_pyxb'
> /tmp/tmp71a430/madlib-1.13.0/src/patch/PyXB.sh: 8:
> /tmp/tmp71a430/madlib-1.13.0/src/patch/PyXB.sh: patch: not found
> src/CMakeFiles/EP_pyxb.dir/build.make:101: recipe for target
> 'third_party/src/EP_pyxb-stamp/EP_pyxb-patch' failed
> make[3]: *** [third_party/src/EP_pyxb-stamp/EP_pyxb-patch] Error 127
> make[3]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
> CMakeFiles/Makefile2:181: recipe for target 'src/CMakeFiles/EP_pyxb.dir/all'
> failed
> make[2]: *** [src/CMakeFiles/EP_pyxb.dir/all] Error 2
> make[2]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
> Makefile:149: recipe for target 'all' failed
> make[1]: *** [all] Error 2
> make[1]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
> Makefile:5: recipe for target 'all' failed
> make: *** [all] Error 2
> ERROR: command returned 2: make PG_CONFIG=/usr/bin/pg_config all
> {code}
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