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https://issues.apache.org/jira/browse/SPARK-19364?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Andrew Milkowski updated SPARK-19364:
-------------------------------------
Description:
*** update *** we found that below situation occurs when we encounter
"com.amazonaws.services.kinesis.clientlibrary.exceptions.ShutdownException:
Can't update checkpoint - instance doesn't hold the lease for this shard"
https://github.com/awslabs/amazon-kinesis-client/issues/108
we use s3 directory (and dynamodb) to store checkpoints, but if such occurs
blocks should not get stuck but continue graecfully
running standard kinesis stream ingestion with a java spark app and creating
dstream after running for some time some block streams seem to persist forever
and never cleaned up and this eventually leads to memory depletion on workers
we even tried cleaning RDD's with the following:
cleaner = ssc.sparkContext().sc().cleaner().get();
filtered.foreachRDD(new VoidFunction<JavaRDD<String>>() {
@Override
public void call(JavaRDD<String> rdd) throws Exception {
cleaner.doCleanupRDD(rdd.id(), true);
}
});
despite above blocks do persis still, this can be seen in spark admin UI
for instance
input-0-1485362233945 1 ip-<>:34245 Memory Serialized 1442.5
KB
above block stays and is never cleaned up
was:
running standard kinesis stream ingestion with a java spark app and creating
dstream after running for some time some block streams seem to persist forever
and never cleaned up and this eventually leads to memory depletion on workers
we even tried cleaning RDD's with the following:
cleaner = ssc.sparkContext().sc().cleaner().get();
filtered.foreachRDD(new VoidFunction<JavaRDD<String>>() {
@Override
public void call(JavaRDD<String> rdd) throws Exception {
cleaner.doCleanupRDD(rdd.id(), true);
}
});
despite above blocks do persis still, this can be seen in spark admin UI
for instance
input-0-1485362233945 1 ip-<>:34245 Memory Serialized 1442.5
KB
above block stays and is never cleaned up
> Some Stream Blocks in Storage Persists Forever
> ----------------------------------------------
>
> Key: SPARK-19364
> URL: https://issues.apache.org/jira/browse/SPARK-19364
> Project: Spark
> Issue Type: Bug
> Components: Spark Core
> Affects Versions: 2.0.2
> Environment: ubuntu unix
> spark 2.0.2
> application is java
> Reporter: Andrew Milkowski
>
> *** update *** we found that below situation occurs when we encounter
> "com.amazonaws.services.kinesis.clientlibrary.exceptions.ShutdownException:
> Can't update checkpoint - instance doesn't hold the lease for this shard"
> https://github.com/awslabs/amazon-kinesis-client/issues/108
> we use s3 directory (and dynamodb) to store checkpoints, but if such occurs
> blocks should not get stuck but continue graecfully
> running standard kinesis stream ingestion with a java spark app and creating
> dstream after running for some time some block streams seem to persist
> forever and never cleaned up and this eventually leads to memory depletion on
> workers
> we even tried cleaning RDD's with the following:
> cleaner = ssc.sparkContext().sc().cleaner().get();
> filtered.foreachRDD(new VoidFunction<JavaRDD<String>>() {
> @Override
> public void call(JavaRDD<String> rdd) throws Exception {
> cleaner.doCleanupRDD(rdd.id(), true);
> }
> });
> despite above blocks do persis still, this can be seen in spark admin UI
> for instance
> input-0-1485362233945 1 ip-<>:34245 Memory Serialized 1442.5
> KB
> above block stays and is never cleaned up
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