[
https://issues.apache.org/jira/browse/SPARK-19208?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15848140#comment-15848140
]
zhengruifeng commented on SPARK-19208:
--------------------------------------
[~mlnick] What about supporting {{groupBy}} in it? I think it is useful in some
cases, for example, we can use it to compute the {{weightedSum}} per label in
{{NaiveBayes}}, and {{variance}} per label in GaussianNB.
> MultivariateOnlineSummarizer performance optimization
> -----------------------------------------------------
>
> Key: SPARK-19208
> URL: https://issues.apache.org/jira/browse/SPARK-19208
> Project: Spark
> Issue Type: Improvement
> Components: ML
> Reporter: zhengruifeng
> Attachments: Tests.pdf, WechatIMG2621.jpeg
>
>
> Now, {{MaxAbsScaler}} and {{MinMaxScaler}} are using
> {{MultivariateOnlineSummarizer}} to compute the min/max.
> However {{MultivariateOnlineSummarizer}} will also compute extra unused
> statistics. It slows down the task, moreover it is more prone to cause OOM.
> For example:
> env : --driver-memory 4G --executor-memory 1G --num-executors 4
> data:
> [http://www.csie.ntu.edu.tw/~cjlin/libsvmtools/datasets/binary.html#kdd2010%20(bridge%20to%20algebra)]
> 748401 instances, and 29,890,095 features
> {{MaxAbsScaler.fit}} fails because of OOM
> {{MultivariateOnlineSummarizer}} maintains 8 arrays:
> {code}
> private var currMean: Array[Double] = _
> private var currM2n: Array[Double] = _
> private var currM2: Array[Double] = _
> private var currL1: Array[Double] = _
> private var totalCnt: Long = 0
> private var totalWeightSum: Double = 0.0
> private var weightSquareSum: Double = 0.0
> private var weightSum: Array[Double] = _
> private var nnz: Array[Long] = _
> private var currMax: Array[Double] = _
> private var currMin: Array[Double] = _
> {code}
> For {{MaxAbsScaler}}, only 1 array is needed (max of abs value)
> For {{MinMaxScaler}}, only 3 arrays are needed (max, min, nnz)
> After modication in the pr, the above example run successfully.
--
This message was sent by Atlassian JIRA
(v6.3.15#6346)
---------------------------------------------------------------------
To unsubscribe, e-mail: [email protected]
For additional commands, e-mail: [email protected]