Andrey Yatsuk created SPARK-19947:
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             Summary: RFormulaModel always throws Exception on transforming 
data with NULL or Unseen labels
                 Key: SPARK-19947
                 URL: https://issues.apache.org/jira/browse/SPARK-19947
             Project: Spark
          Issue Type: Improvement
          Components: ML
    Affects Versions: 2.1.0
            Reporter: Andrey Yatsuk


I have trained ML model and big data table in parquet. I want add new column to 
this table with predicted values. I can't lose any data, but can having null 
values in it.

RFormulaModel.fit() method creates new StringIndexer with default 
(handleInvalid="error") parameter. Also VectorAssembler on NULL values throwing 
Exception. So I must call df.na.drop() to transform this DataFrame and I don't 
want to do this.

Need add to RFormula new parameter like handleInvalid in StringIndexer.

Or add transform(Seq<Column>): Vector method which user can use as UDF method 
in df.withColumn("predicted", functions.callUDF(rFormulaModel::transform, 
Seq<Column>))



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