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https://issues.apache.org/jira/browse/SPARK-21782?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
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Sergey Serebryakov updated SPARK-21782:
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Attachment: Screen Shot 2017-08-16 at 3.40.01 PM.png
Distribution of partition sizes (in bytes) spotted in the wild. Horizontal
axis: partition index ({{0..1023}}). Vertical axis: partition size in bytes.
> Repartition creates skews when numPartitions is a power of 2
> ------------------------------------------------------------
>
> Key: SPARK-21782
> URL: https://issues.apache.org/jira/browse/SPARK-21782
> Project: Spark
> Issue Type: Bug
> Components: Spark Core
> Affects Versions: 2.2.0
> Reporter: Sergey Serebryakov
> Labels: repartition
> Attachments: Screen Shot 2017-08-16 at 3.40.01 PM.png
>
>
> *Problem:*
> When an RDD (particularly with a low item-per-partition ratio) is
> repartitioned to {{numPartitions}} = power of 2, the resulting partitions are
> very uneven-sized. This affects both {{repartition()}} and
> {{coalesce(shuffle=true)}}.
> *Steps to reproduce:*
> {code}
> $ spark-shell
> scala> sc.parallelize(0 until 1000,
> 250).repartition(64).glom().map(_.length).collect()
> res0: Array[Int] = Array(0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
> 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
> 0, 0, 0, 0, 144, 250, 250, 250, 106, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0)
> {code}
> *Explanation:*
> Currently, the [algorithm for
> repartition|https://github.com/apache/spark/blob/v2.2.0/core/src/main/scala/org/apache/spark/rdd/RDD.scala#L450]
> (shuffle-enabled coalesce) is as follows:
> - for each initial partition {{index}}, generate {{position}} as {{(new
> Random(index)).nextInt(numPartitions)}}
> - then, for element number {{k}} in initial partition {{index}}, put it in
> the new partition {{position + k}} (modulo {{numPartitions}}).
> So, essentially elements are smeared roughly equally over {{numPartitions}}
> buckets - starting from the one with number {{position+1}}.
> Note that a new instance of {{Random}} is created for every initial partition
> {{index}}, with a fixed seed {{index}}, and then discarded. So the
> {{position}} is deterministic for every {{index}} for any RDD in the world.
> Also, [{{nextInt(bound)}}
> implementation|http://grepcode.com/file/repository.grepcode.com/java/root/jdk/openjdk/8u40-b25/java/util/Random.java/#393]
> has a special case when {{bound}} is a power of 2, which is basically taking
> several highest bits from the initial seed, with only a minimal scrambling.
> Due to deterministic seed, using the generator only once, and lack of
> scrambling, the {{position}} values for power-of-two {{numPartitions}} always
> end up being almost the same regardless of the {{index}}, causing some
> buckets to be much more popular than others. So, {{repartition}} will in fact
> intentionally produce skewed partitions even when before the partition were
> roughly equal in size.
> The behavior seems to have been introduced in SPARK-1770 by
> https://github.com/apache/spark/pull/727/
> {quote}
> The load balancing is not perfect: a given output partition
> can have up to N more elements than the average if there are N input
> partitions. However, some randomization is used to minimize the
> probabiliy that this happens.
> {quote}
> Another related ticket: SPARK-17817 -
> https://github.com/apache/spark/pull/15445
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