[
https://issues.apache.org/jira/browse/SPARK-23130?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Sean Roberts updated SPARK-23130:
---------------------------------
Description:
Spark Thrift is not cleaning up /tmp for files & directories named like:
/tmp/hive/*.pipeout
/tmp/*_resources
There are such a large number that /tmp quickly runs out of inodes *causing the
partition to be unusable and many services to crash*. This is even true when
the only jobs submitted are routine service checks.
Used `strace` to show that Spark Thrift is responsible:
{code:java}
strace.out.118864:04:53:49
open("/tmp/hive/55ad7fc1-f79a-4ad8-8e02-26bbeaa86bbc7288010135864174970.pipeout",
O_RDWR|O_CREAT|O_EXCL, 0666) = 134
strace.out.118864:04:53:49
mkdir("/tmp/b6dfbf9e-2f7c-4c25-95a1-73c44318ecf4_resources", 0777) = 0
{code}
*Those files were left behind, even days later.*
----
Example files:
{code:java}
# stat /tmp/hive/55ad7fc1-f79a-4ad8-8e02-26bbeaa86bbc7288010135864174970.pipeout
File:
‘/tmp/hive/55ad7fc1-f79a-4ad8-8e02-26bbeaa86bbc7288010135864174970.pipeout’
Size: 0 Blocks: 0 IO Block: 4096 regular empty file
Device: fe09h/65033d Inode: 678 Links: 1
Access: (0644/-rw-r--r--) Uid: ( 1000/ hive) Gid: ( 1002/ hadoop)
Access: 2017-12-19 04:53:49.126777260 -0600
Modify: 2017-12-19 04:53:49.126777260 -0600
Change: 2017-12-19 04:53:49.126777260 -0600
Birth: -
# stat /tmp/b6dfbf9e-2f7c-4c25-95a1-73c44318ecf4_resources
File: ‘/tmp/b6dfbf9e-2f7c-4c25-95a1-73c44318ecf4_resources’
Size: 4096 Blocks: 8 IO Block: 4096 directory
Device: fe09h/65033d Inode: 668 Links: 2
Access: (0700/drwx------) Uid: ( 1000/ hive) Gid: ( 1002/ hadoop)
Access: 2017-12-19 04:57:38.458937635 -0600
Modify: 2017-12-19 04:53:49.062777216 -0600
Change: 2017-12-19 04:53:49.066777218 -0600
Birth: -
{code}
Showing the large number:
{code:java}
# find /tmp/ -name '*_resources' | wc -l
68340
# find /tmp/hive -name "*.pipeout" | wc -l
51837
{code}
was:
Spark Thrift is not cleaning up /tmp for files & directories named like:
/tmp/hive/*.pipeout
/tmp/*_resources
There are such a large number that /tmp quickly runs out of inodes *causing the
partition to be unusable and many services to crash*. This is even true when
the only jobs submitted are routine service checks.
Used `strace` to show that Spark Thrift is responsible:
{code:java}
strace.out.118864:04:53:49
open("/tmp/hive/55ad7fc1-f79a-4ad8-8e02-26bbeaa86bbc7288010135864174970.pipeout",
O_RDWR|O_CREAT|O_EXCL, 0666) = 134
strace.out.118864:04:53:49
mkdir("/tmp/b6dfbf9e-2f7c-4c25-95a1-73c44318ecf4_resources", 0777) = 0
{code}
*Those files were left behind, even days later.*
**
----
Example files:
{code:java}
# stat /tmp/hive/55ad7fc1-f79a-4ad8-8e02-26bbeaa86bbc7288010135864174970.pipeout
File:
‘/tmp/hive/55ad7fc1-f79a-4ad8-8e02-26bbeaa86bbc7288010135864174970.pipeout’
Size: 0 Blocks: 0 IO Block: 4096 regular empty file
Device: fe09h/65033d Inode: 678 Links: 1
Access: (0644/-rw-r--r--) Uid: ( 1000/ hive) Gid: ( 1002/ hadoop)
Access: 2017-12-19 04:53:49.126777260 -0600
Modify: 2017-12-19 04:53:49.126777260 -0600
Change: 2017-12-19 04:53:49.126777260 -0600
Birth: -
# stat /tmp/b6dfbf9e-2f7c-4c25-95a1-73c44318ecf4_resources
File: ‘/tmp/b6dfbf9e-2f7c-4c25-95a1-73c44318ecf4_resources’
Size: 4096 Blocks: 8 IO Block: 4096 directory
Device: fe09h/65033d Inode: 668 Links: 2
Access: (0700/drwx------) Uid: ( 1000/ hive) Gid: ( 1002/ hadoop)
Access: 2017-12-19 04:57:38.458937635 -0600
Modify: 2017-12-19 04:53:49.062777216 -0600
Change: 2017-12-19 04:53:49.066777218 -0600
Birth: -
{code}
Showing the large number:
{code:java}
# find /tmp/ -name '*_resources' | wc -l
68340
# find /tmp/hive -name "*.pipeout" | wc -l
51837
{code}
> Spark Thrift does not clean-up temporary files (/tmp/*_resources and
> /tmp/hive/*.pipeout)
> -----------------------------------------------------------------------------------------
>
> Key: SPARK-23130
> URL: https://issues.apache.org/jira/browse/SPARK-23130
> Project: Spark
> Issue Type: Bug
> Components: SQL
> Affects Versions: 1.6.3, 2.1.0, 2.2.0
> Environment: * Hadoop distributions: HDP 2.5 - 2.6.3.0
> * OS: Seen on SLES12, RHEL 7.3 & RHEL 7.4
> Reporter: Sean Roberts
> Priority: Major
>
> Spark Thrift is not cleaning up /tmp for files & directories named like:
> /tmp/hive/*.pipeout
> /tmp/*_resources
> There are such a large number that /tmp quickly runs out of inodes *causing
> the partition to be unusable and many services to crash*. This is even true
> when the only jobs submitted are routine service checks.
> Used `strace` to show that Spark Thrift is responsible:
> {code:java}
> strace.out.118864:04:53:49
> open("/tmp/hive/55ad7fc1-f79a-4ad8-8e02-26bbeaa86bbc7288010135864174970.pipeout",
> O_RDWR|O_CREAT|O_EXCL, 0666) = 134
> strace.out.118864:04:53:49
> mkdir("/tmp/b6dfbf9e-2f7c-4c25-95a1-73c44318ecf4_resources", 0777) = 0
> {code}
> *Those files were left behind, even days later.*
> ----
> Example files:
> {code:java}
> # stat
> /tmp/hive/55ad7fc1-f79a-4ad8-8e02-26bbeaa86bbc7288010135864174970.pipeout
> File:
> ‘/tmp/hive/55ad7fc1-f79a-4ad8-8e02-26bbeaa86bbc7288010135864174970.pipeout’
> Size: 0 Blocks: 0 IO Block: 4096 regular empty file
> Device: fe09h/65033d Inode: 678 Links: 1
> Access: (0644/-rw-r--r--) Uid: ( 1000/ hive) Gid: ( 1002/ hadoop)
> Access: 2017-12-19 04:53:49.126777260 -0600
> Modify: 2017-12-19 04:53:49.126777260 -0600
> Change: 2017-12-19 04:53:49.126777260 -0600
> Birth: -
> # stat /tmp/b6dfbf9e-2f7c-4c25-95a1-73c44318ecf4_resources
> File: ‘/tmp/b6dfbf9e-2f7c-4c25-95a1-73c44318ecf4_resources’
> Size: 4096 Blocks: 8 IO Block: 4096 directory
> Device: fe09h/65033d Inode: 668 Links: 2
> Access: (0700/drwx------) Uid: ( 1000/ hive) Gid: ( 1002/ hadoop)
> Access: 2017-12-19 04:57:38.458937635 -0600
> Modify: 2017-12-19 04:53:49.062777216 -0600
> Change: 2017-12-19 04:53:49.066777218 -0600
> Birth: -
> {code}
> Showing the large number:
> {code:java}
> # find /tmp/ -name '*_resources' | wc -l
> 68340
> # find /tmp/hive -name "*.pipeout" | wc -l
> 51837
> {code}
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