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https://issues.apache.org/jira/browse/SPARK-18105?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16861803#comment-16861803
]
M. Le Bihan edited comment on SPARK-18105 at 6/18/19 4:37 PM:
--------------------------------------------------------------
It _seems_ that exchanging from org.lz4:lz4-java:1.4.0 to
org.lz4:lz4-java:1.6.0 helps.
{code:java}
<!-- Dépendances Spark : en provided pour la compilation classique : il
sera disponible ainsi pour les tests d'intégration -->
<dependency>
<groupId>org.apache.spark</groupId>
<artifactId>spark-core_2.11</artifactId>
<version>${spark.version}</version>
<!-- Exclusion de ses loggers -->
<exclusions>
<exclusion>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-log4j12</artifactId>
</exclusion>
<exclusion>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
</exclusion>
<exclusion>
<groupId>org.lz4</groupId>
<artifactId>lz4-java</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.lz4</groupId>
<artifactId>lz4-java</artifactId>
<version>1.6.0</version>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>log4j-over-slf4j</artifactId>
</dependency>
<dependency>
<groupId>org.apache.spark</groupId>
<artifactId>spark-sql_2.11</artifactId>
<version>${spark.version}</version>
</dependency>
</dependencies>{code}
If it's right, the cause _could be_ a bug they corrected on 1.4.1.
Didn't succeed.
was (Author: mlebihan):
It _seems_ that exchanging from org.lz4:lz4-java:1.4.0 to
org.lz4:lz4-java:1.6.0 helps.
{code:java}
<!-- Dépendances Spark : en provided pour la compilation classique : il
sera disponible ainsi pour les tests d'intégration -->
<dependency>
<groupId>org.apache.spark</groupId>
<artifactId>spark-core_2.11</artifactId>
<version>${spark.version}</version>
<!-- Exclusion de ses loggers -->
<exclusions>
<exclusion>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-log4j12</artifactId>
</exclusion>
<exclusion>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
</exclusion>
<exclusion>
<groupId>org.lz4</groupId>
<artifactId>lz4-java</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.lz4</groupId>
<artifactId>lz4-java</artifactId>
<version>1.6.0</version>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>log4j-over-slf4j</artifactId>
</dependency>
<dependency>
<groupId>org.apache.spark</groupId>
<artifactId>spark-sql_2.11</artifactId>
<version>${spark.version}</version>
</dependency>
</dependencies>{code}
If it's right, the cause _could be_ a bug they corrected on 1.4.1.
> LZ4 failed to decompress a stream of shuffled data
> --------------------------------------------------
>
> Key: SPARK-18105
> URL: https://issues.apache.org/jira/browse/SPARK-18105
> Project: Spark
> Issue Type: Bug
> Components: Spark Core
> Reporter: Davies Liu
> Assignee: Davies Liu
> Priority: Major
>
> When lz4 is used to compress the shuffle files, it may fail to decompress it
> as "stream is corrupt"
> {code}
> Caused by: org.apache.spark.SparkException: Job aborted due to stage failure:
> Task 92 in stage 5.0 failed 4 times, most recent failure: Lost task 92.3 in
> stage 5.0 (TID 16616, 10.0.27.18): java.io.IOException: Stream is corrupted
> at
> org.apache.spark.io.LZ4BlockInputStream.refill(LZ4BlockInputStream.java:220)
> at
> org.apache.spark.io.LZ4BlockInputStream.available(LZ4BlockInputStream.java:109)
> at java.io.BufferedInputStream.read(BufferedInputStream.java:353)
> at java.io.DataInputStream.read(DataInputStream.java:149)
> at com.google.common.io.ByteStreams.read(ByteStreams.java:828)
> at com.google.common.io.ByteStreams.readFully(ByteStreams.java:695)
> at
> org.apache.spark.sql.execution.UnsafeRowSerializerInstance$$anon$3$$anon$1.next(UnsafeRowSerializer.scala:127)
> at
> org.apache.spark.sql.execution.UnsafeRowSerializerInstance$$anon$3$$anon$1.next(UnsafeRowSerializer.scala:110)
> at scala.collection.Iterator$$anon$13.next(Iterator.scala:372)
> at scala.collection.Iterator$$anon$11.next(Iterator.scala:328)
> at
> org.apache.spark.util.CompletionIterator.next(CompletionIterator.scala:30)
> at
> org.apache.spark.InterruptibleIterator.next(InterruptibleIterator.scala:43)
> at scala.collection.Iterator$$anon$11.next(Iterator.scala:328)
> at
> org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.sort_addToSorter$(Unknown
> Source)
> at
> org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.processNext(Unknown
> Source)
> at
> org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
> at
> org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$8$$anon$1.hasNext(WholeStageCodegenExec.scala:370)
> at
> org.apache.spark.sql.execution.datasources.DynamicPartitionWriterContainer.writeRows(WriterContainer.scala:397)
> at
> org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelationCommand$$anonfun$run$1$$anonfun$apply$mcV$sp$1.apply(InsertIntoHadoopFsRelationCommand.scala:143)
> at
> org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelationCommand$$anonfun$run$1$$anonfun$apply$mcV$sp$1.apply(InsertIntoHadoopFsRelationCommand.scala:143)
> at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:70)
> at org.apache.spark.scheduler.Task.run(Task.scala:86)
> at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:274)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:745)
> {code}
> https://github.com/jpountz/lz4-java/issues/89
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