Babble Shack created SPARK-31347:
------------------------------------
Summary: Unable to run Spark Job on Federated Yarn Cluster,
AMRMToken invalid
Key: SPARK-31347
URL: https://issues.apache.org/jira/browse/SPARK-31347
Project: Spark
Issue Type: Bug
Components: Deploy, YARN
Affects Versions: 3.0.0
Reporter: Babble Shack
Running Spark on Yarn 3.2.1 in federated cluster
ApplicationMaster fails to register with resourcemanager, and throws a
InvalidToken exception.
{code:java}
root@yarn-master-0:/hadoop/spark# HADOOP_CONF_DIR=/hadoop/federation/router
./bin/spark-submit
--class org.apache.spark.examples.SparkPi \
--master yarn \
--deploy-mode cluster \
--driver-memory 4g \
--executor-memory 2g \
--executor-cores 1 \
--queue default \
examples/jars/spark-examples*.jar 10
2020-04-04 16:44:18,144 WARN util.NativeCodeLoader: Unable to load
native-hadoop library for your platform... using builtin-java classes where
applicable
2020-04-04 16:44:18,345 INFO client.AHSProxy: Connecting to Application History
server at /0.0.0.0:10200
2020-04-04 16:44:18,402 INFO yarn.Client: Requesting a new application from
cluster with 10 NodeManagers
2020-04-04 16:44:18,753 INFO conf.Configuration: resource-types.xml not found
2020-04-04 16:44:18,754 INFO resource.ResourceUtils: Unable to find
'resource-types.xml'.
2020-04-04 16:44:18,766 INFO yarn.Client: Verifying our application has not
requested more than the maximum memory capability of the cluster (7168 MB per
container)
2020-04-04 16:44:18,767 INFO yarn.Client: Will allocate AM container, with 4505
MB memory including 409 MB overhead
2020-04-04 16:44:18,767 INFO yarn.Client: Setting up container launch context
for our AM
2020-04-04 16:44:18,768 INFO yarn.Client: Setting up the launch environment for
our AM container
2020-04-04 16:44:18,776 INFO yarn.Client: Preparing resources for our AM
container
2020-04-04 16:44:18,805 WARN yarn.Client: Neither spark.yarn.jars nor
spark.yarn.archive is set, falling back to uploading libraries under
SPARK_HOME.
2020-04-04 16:44:19,890 INFO yarn.Client: Uploading resource
file:/tmp/spark-cfcf1976-612e-4b64-8bf3-5b0c8f1dc6ec/__spark_libs__5444968329971306297.zip
->
hdfs://hdfs-master-0.hdfs-service.hdfs:9000/user/root/.sparkStaging/application_1586018216728_0005/__spark_libs__5444968329971306297.zip
2020-04-04 16:44:22,689 INFO yarn.Client: Uploading resource
file:/hadoop/spark/examples/jars/spark-examples_2.12-3.0.0-preview2.jar ->
hdfs://hdfs-master-0.hdfs-service.hdfs:9000/user/root/.sparkStaging/application_1586018216728_0005/spark-examples_2.12-3.0.0-preview2.jar
2020-04-04 16:44:22,832 INFO yarn.Client: Uploading resource
file:/tmp/spark-cfcf1976-612e-4b64-8bf3-5b0c8f1dc6ec/__spark_conf__2558260056925734476.zip
->
hdfs://hdfs-master-0.hdfs-service.hdfs:9000/user/root/.sparkStaging/application_1586018216728_0005/__spark_conf__.zip
2020-04-04 16:44:22,886 INFO spark.SecurityManager: Changing view acls to: root
2020-04-04 16:44:22,886 INFO spark.SecurityManager: Changing modify acls to:
root
2020-04-04 16:44:22,886 INFO spark.SecurityManager: Changing view acls groups
to:
2020-04-04 16:44:22,887 INFO spark.SecurityManager: Changing modify acls groups
to:
2020-04-04 16:44:22,887 INFO spark.SecurityManager: SecurityManager:
authentication disabled; ui acls disabled; users with view permissions:
Set(root); groups with view permissions: Set(); users with modify permissions:
Set(root); groups with modify permissions: Set()
2020-04-04 16:44:22,927 INFO yarn.Client: Submitting application
application_1586018216728_0005 to ResourceManager
2020-04-04 16:44:22,963 INFO impl.YarnClientImpl: Submitted application
application_1586018216728_0005
2020-04-04 16:44:23,967 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: ACCEPTED)
2020-04-04 16:44:23,969 INFO yarn.Client:
client token: N/A
diagnostics: AM container is launched, waiting for AM container to
Register with RM
ApplicationMaster host: N/A
ApplicationMaster RPC port: -1
queue: default
start time: 1586018662937
final status: UNDEFINED
tracking URL:
http://yarn-master-0.yarn-service.yarn-subcluster-a.svc.cluster.local:8088/proxy/application_1586018216728_0005/
user: root
2020-04-04 16:44:24,972 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: ACCEPTED)
2020-04-04 16:44:25,974 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: ACCEPTED)
2020-04-04 16:44:26,977 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: ACCEPTED)
2020-04-04 16:44:27,980 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: ACCEPTED)
2020-04-04 16:44:28,983 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: ACCEPTED)
2020-04-04 16:44:29,985 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: ACCEPTED)
2020-04-04 16:44:30,988 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: ACCEPTED)
2020-04-04 16:44:31,991 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: ACCEPTED)
2020-04-04 16:44:32,994 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: ACCEPTED)
2020-04-04 16:44:33,996 INFO yarn.Client: Application report for
application_1586018216728_0005 (state: FAILED)
2020-04-04 16:44:33,997 INFO yarn.Client:
client token: N/A
diagnostics: Application application_1586018216728_0005 failed 2 times
due to AM Container for appattempt_1586018216728_0005_000002 exited with
exitCode: 13
Failing this attempt.Diagnostics: [2020-04-04 16:44:33.276]Exception from
container-launch.
Container id: container_e27933_1586018216728_0005_02_000001
Exit code: 13
[2020-04-04 16:44:33.297]Container exited with a non-zero exit code 13. Error
file: prelaunch.err.
Last 4096 bytes of prelaunch.err :
Last 4096 bytes of stderr :
ect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.yarn.ipc.RPCUtil.instantiateException(RPCUtil.java:53)
at org.apache.hadoop.yarn.ipc.RPCUtil.instantiateIOException(RPCUtil.java:80)
at
org.apache.hadoop.yarn.ipc.RPCUtil.unwrapAndThrowException(RPCUtil.java:119)
at
org.apache.hadoop.yarn.api.impl.pb.client.ApplicationMasterProtocolPBClientImpl.registerApplicationMaster(ApplicationMasterProtocolPBClientImpl.java:109)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at
org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:422)
at
org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeMethod(RetryInvocationHandler.java:165)
at
org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invoke(RetryInvocationHandler.java:157)
at
org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeOnce(RetryInvocationHandler.java:95)
at
org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:359)
at com.sun.proxy.$Proxy16.registerApplicationMaster(Unknown Source)
at
org.apache.hadoop.yarn.client.api.impl.AMRMClientImpl.registerApplicationMaster(AMRMClientImpl.java:246)
at
org.apache.hadoop.yarn.client.api.impl.AMRMClientImpl.registerApplicationMaster(AMRMClientImpl.java:233)
at
org.apache.hadoop.yarn.client.api.impl.AMRMClientImpl.registerApplicationMaster(AMRMClientImpl.java:213)
at org.apache.spark.deploy.yarn.YarnRMClient.register(YarnRMClient.scala:71)
at
org.apache.spark.deploy.yarn.ApplicationMaster.registerAM(ApplicationMaster.scala:426)
at
org.apache.spark.deploy.yarn.ApplicationMaster.runDriver(ApplicationMaster.scala:504)
at
org.apache.spark.deploy.yarn.ApplicationMaster.run(ApplicationMaster.scala:262)
at
org.apache.spark.deploy.yarn.ApplicationMaster$$anon$3.run(ApplicationMaster.scala:875)
at
org.apache.spark.deploy.yarn.ApplicationMaster$$anon$3.run(ApplicationMaster.scala:874)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1730)
at
org.apache.spark.deploy.yarn.ApplicationMaster$.main(ApplicationMaster.scala:874)
at org.apache.spark.deploy.yarn.ApplicationMaster.main(ApplicationMaster.scala)
Caused by:
org.apache.hadoop.ipc.RemoteException(org.apache.hadoop.security.token.SecretManager$InvalidToken):
Invalid AMRMToken from appattempt_1586018216728_0005_000002
at org.apache.hadoop.ipc.Client.getRpcResponse(Client.java:1511)
at org.apache.hadoop.ipc.Client.call(Client.java:1457)
at org.apache.hadoop.ipc.Client.call(Client.java:1367)
at
org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:228)
at
org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:116)
at com.sun.proxy.$Proxy15.registerApplicationMaster(Unknown Source)
at
org.apache.hadoop.yarn.api.impl.pb.client.ApplicationMasterProtocolPBClientImpl.registerApplicationMaster(ApplicationMasterProtocolPBClientImpl.java:107)
... 24 more
)
2020-04-04 16:44:32,555 INFO yarn.ApplicationMaster: Deleting staging directory
hdfs://hdfs-master-0.hdfs-service.hdfs:9000/user/root/.sparkStaging/application_1586018216728_0005
2020-04-04 16:44:32,926 INFO storage.DiskBlockManager: Shutdown hook called
2020-04-04 16:44:32,930 INFO util.ShutdownHookManager: Shutdown hook called
2020-04-04 16:44:32,930 INFO util.ShutdownHookManager: Deleting directory
/opt/hadoop/hadooptmpdata/nm-local-dir/usercache/root/appcache/application_1586018216728_0005/spark-5d3f083f-eb43-49e9-a779-2354e07e9bd7/userFiles-1721c4df-1674-4695-b3aa-02e8c72908c0
2020-04-04 16:44:32,932 INFO util.ShutdownHookManager: Deleting directory
/opt/hadoop/hadooptmpdata/nm-local-dir/usercache/root/appcache/application_1586018216728_0005/spark-5d3f083f-eb43-49e9-a779-2354e07e9bd7
{code}
Submitting this here and not in Yarn Jira because Hadoop Mapred Jobs run
normally in the same cluster.
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