Lutz Weischer created SPARK-34717:
-------------------------------------
Summary: run-tests fails on AArch64, Fedora 33
Key: SPARK-34717
URL: https://issues.apache.org/jira/browse/SPARK-34717
Project: Spark
Issue Type: Bug
Components: Build
Affects Versions: 3.1.1
Reporter: Lutz Weischer
[jw@cn06 spark]$ ./dev/run-tests
+++ dirname /home/jw/apache/spark/R/install-dev.sh
++ cd /home/jw/apache/spark/R
++ pwd
+ FWDIR=/home/jw/apache/spark/R
+ LIB_DIR=/home/jw/apache/spark/R/lib
+ mkdir -p /home/jw/apache/spark/R/lib
+ pushd /home/jw/apache/spark/R
+ . /home/jw/apache/spark/R/find-r.sh
++ '[' -z '' ']'
++ '[' '!' -z '' ']'
+++ command -v R
++ '[' '!' /usr/bin/R ']'
++++ which R
+++ dirname /usr/bin/R
++ R_SCRIPT_PATH=/usr/bin
++ echo 'Using R_SCRIPT_PATH = /usr/bin'
Using R_SCRIPT_PATH = /usr/bin
+ . /home/jw/apache/spark/R/create-rd.sh
++ set -o pipefail
++ set -e
++++ dirname /home/jw/apache/spark/R/create-rd.sh
+++ cd /home/jw/apache/spark/R
+++ pwd
++ FWDIR=/home/jw/apache/spark/R
++ pushd /home/jw/apache/spark/R
++ . /home/jw/apache/spark/R/find-r.sh
+++ '[' -z /usr/bin ']'
++ /usr/bin/Rscript -e ' if(requireNamespace("devtools", quietly=TRUE)) {
setwd("/home/jw/apache/spark/R"); devtools::document(pkg="./pkg", roclets="rd")
}'
+ /usr/bin/R CMD INSTALL --library=/home/jw/apache/spark/R/lib
/home/jw/apache/spark/R/pkg/
* installing *source* package 'SparkR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'as.data.frame' in package 'SparkR'
Creating a new generic function for 'colnames' in package 'SparkR'
Creating a new generic function for 'colnames<-' in package 'SparkR'
Creating a new generic function for 'cov' in package 'SparkR'
Creating a new generic function for 'drop' in package 'SparkR'
Creating a new generic function for 'na.omit' in package 'SparkR'
Creating a new generic function for 'filter' in package 'SparkR'
Creating a new generic function for 'intersect' in package 'SparkR'
Creating a new generic function for 'sample' in package 'SparkR'
Creating a new generic function for 'transform' in package 'SparkR'
Creating a new generic function for 'subset' in package 'SparkR'
Creating a new generic function for 'summary' in package 'SparkR'
Creating a new generic function for 'union' in package 'SparkR'
Creating a new generic function for 'endsWith' in package 'SparkR'
Creating a new generic function for 'startsWith' in package 'SparkR'
Creating a new generic function for 'lag' in package 'SparkR'
Creating a new generic function for 'rank' in package 'SparkR'
Creating a new generic function for 'sd' in package 'SparkR'
Creating a new generic function for 'var' in package 'SparkR'
Creating a new generic function for 'window' in package 'SparkR'
Creating a new generic function for 'predict' in package 'SparkR'
Creating a new generic function for 'rbind' in package 'SparkR'
Creating a generic function for 'substr' from package 'base' in package 'SparkR'
Creating a generic function for '%in%' from package 'base' in package 'SparkR'
Creating a generic function for 'lapply' from package 'base' in package 'SparkR'
Creating a generic function for 'Filter' from package 'base' in package 'SparkR'
Creating a generic function for 'nrow' from package 'base' in package 'SparkR'
Creating a generic function for 'ncol' from package 'base' in package 'SparkR'
Creating a generic function for 'factorial' from package 'base' in package
'SparkR'
Creating a generic function for 'atan2' from package 'base' in package 'SparkR'
Creating a generic function for 'ifelse' from package 'base' in package 'SparkR'
** help
No man pages found in package 'SparkR'
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SparkR)
+ cd /home/jw/apache/spark/R/lib
+ jar cfM /home/jw/apache/spark/R/lib/sparkr.zip SparkR
+ popd
[info] Using build tool sbt with Hadoop profile hadoop3.2 and Hive profile
hive2.3 under environment local
[info] Found the following changed modules: root
[info] Setup the following environment variables for tests:
========================================================================
Running Apache RAT checks
========================================================================
Attempting to fetch rat
Could not find Apache license headers in the following files:
!????? /home/jw/apache/spark/R/lib/SparkR/Meta/Rd.rds
!????? /home/jw/apache/spark/R/lib/SparkR/Meta/features.rds
!????? /home/jw/apache/spark/R/lib/SparkR/Meta/hsearch.rds
!????? /home/jw/apache/spark/R/lib/SparkR/Meta/links.rds
!????? /home/jw/apache/spark/R/lib/SparkR/Meta/nsInfo.rds
!????? /home/jw/apache/spark/R/lib/SparkR/Meta/package.rds
!????? /home/jw/apache/spark/R/lib/SparkR/R/SparkR.rdb
!????? /home/jw/apache/spark/R/lib/SparkR/R/SparkR.rdx
!????? /home/jw/apache/spark/core/src/test/resources/keystore
!????? /home/jw/apache/spark/core/src/test/resources/untrusted-keystore
!????? /home/jw/apache/spark/examples/src/main/resources/users.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/before_1582_date_v2_4_5.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/before_1582_date_v2_4_6.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/before_1582_timestamp_micros_v2_4_5.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/before_1582_timestamp_micros_v2_4_6.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/before_1582_timestamp_millis_v2_4_5.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/before_1582_timestamp_millis_v2_4_6.avro
!????? /home/jw/apache/spark/external/avro/src/test/resources/episodes.avro
!????? /home/jw/apache/spark/external/avro/src/test/resources/test.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00000.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00001.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00002.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00003.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00004.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00005.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00006.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00007.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00008.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00009.avro
!?????
/home/jw/apache/spark/external/avro/src/test/resources/test-random-partitioned/part-r-00010.avro
!?????
/home/jw/apache/spark/mllib/src/test/resources/ml-models/dtc-2.4.7/data/.part-00000-bd7ae42f-c890-406c-894c-ca4eac67c690-c000.snappy.parquet.crc
!?????
/home/jw/apache/spark/mllib/src/test/resources/ml-models/dtr-2.4.7/data/.part-00000-39b027f0-a437-4b3d-84af-d861adcb9ca8-c000.snappy.parquet.crc
!?????
/home/jw/apache/spark/mllib/src/test/resources/ml-models/gbtc-2.4.7/data/.part-00000-dacbde64-c861-41c7-91c0-6da8cc01fb43-c000.snappy.parquet.crc
!?????
/home/jw/apache/spark/mllib/src/test/resources/ml-models/gbtc-2.4.7/treesMetadata/.part-00000-81137d9f-31e3-4a90-813c-ddc394101e21-c000.snappy.parquet.crc
!?????
/home/jw/apache/spark/mllib/src/test/resources/ml-models/gbtr-2.4.7/data/.part-00000-3b5433ff-d346-4511-9aab-639288bfae6d-c000.snappy.parquet.crc
!?????
/home/jw/apache/spark/mllib/src/test/resources/ml-models/gbtr-2.4.7/treesMetadata/.part-00000-6b9124f5-87fe-4fd8-ad9c-4be239c2215a-c000.snappy.parquet.crc
!?????
/home/jw/apache/spark/mllib/src/test/resources/ml-models/mlp-2.4.4/data/.part-00000-fa18aaf6-d8df-4b90-8231-eb5f6ac12138-c000.snappy.parquet.crc
!?????
/home/jw/apache/spark/mllib/src/test/resources/ml-models/rfc-2.4.7/data/.part-00000-e41a7b98-91f8-4485-b112-25b4b11c9009-c000.snappy.parquet.crc
!?????
/home/jw/apache/spark/mllib/src/test/resources/ml-models/rfc-2.4.7/treesMetadata/.part-00000-21082d24-b666-4c4e-a823-70c7afdcbdc5-c000.snappy.parquet.crc
!????? /home/jw/apache/spark/mllib/src/test/resources/ml-models/rfr-2.4.
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[error] running /home/jw/apache/spark/dev/check-license ; received return code 1
[jw@cn06 spark]$
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