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https://issues.apache.org/jira/browse/SYSTEMML-1211?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15872537#comment-15872537
]
Matthias Boehm commented on SYSTEMML-1211:
------------------------------------------
[~deron] after the change from hadoop 2.4.1 to 2.6.0, all junit tests are
failing in my win environment as follows. Could it be that we also need to
update the hadoop_bin_windows. [~gweidner] do you experience the same problem?
{code}
java.lang.UnsatisfiedLinkError:
org.apache.hadoop.util.NativeCrc32.nativeComputeChunkedSumsByteArray(II[BI[BIILjava/lang/String;JZ)V
at
org.apache.hadoop.util.NativeCrc32.nativeComputeChunkedSumsByteArray(Native
Method)
at
org.apache.hadoop.util.NativeCrc32.calculateChunkedSumsByteArray(NativeCrc32.java:86)
at
org.apache.hadoop.util.DataChecksum.calculateChunkedSums(DataChecksum.java:430)
at
org.apache.hadoop.fs.FSOutputSummer.writeChecksumChunks(FSOutputSummer.java:202)
at
org.apache.hadoop.fs.FSOutputSummer.flushBuffer(FSOutputSummer.java:163)
at
org.apache.hadoop.fs.FSOutputSummer.flushBuffer(FSOutputSummer.java:144)
at
org.apache.hadoop.fs.ChecksumFileSystem$ChecksumFSOutputSummer.close(ChecksumFileSystem.java:400)
at
org.apache.hadoop.fs.FSDataOutputStream$PositionCache.close(FSDataOutputStream.java:72)
at
org.apache.hadoop.fs.FSDataOutputStream.close(FSDataOutputStream.java:106)
at sun.nio.cs.StreamEncoder.implClose(StreamEncoder.java:320)
at sun.nio.cs.StreamEncoder.close(StreamEncoder.java:149)
at java.io.OutputStreamWriter.close(OutputStreamWriter.java:233)
at java.io.BufferedWriter.close(BufferedWriter.java:266)
at
org.apache.sysml.test.utils.TestUtils.writeTestMatrix(TestUtils.java:1607)
at
org.apache.sysml.test.utils.TestUtils.writeTestMatrix(TestUtils.java:1627)
at
org.apache.sysml.test.integration.AutomatedTestBase.writeInputMatrix(AutomatedTestBase.java:514)
at
org.apache.sysml.test.integration.AutomatedTestBase.writeInputMatrixWithMTD(AutomatedTestBase.java:540)
at
org.apache.sysml.test.integration.AutomatedTestBase.writeInputMatrixWithMTD(AutomatedTestBase.java:529)
at
org.apache.sysml.test.integration.applications.L2SVMTest.testL2SVM(L2SVMTest.java:108)
at
org.apache.sysml.test.integration.applications.dml.L2SVMDMLTest.testL2SVMDml(L2SVMDMLTest.java:37)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at
org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:47)
at
org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
at
org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:44)
at
org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
at
org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26)
at
org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27)
at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:271)
at
org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:70)
at
org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:63)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
at org.junit.runners.ParentRunner.run(ParentRunner.java:309)
at org.junit.runners.Suite.runChild(Suite.java:127)
at org.junit.runners.Suite.runChild(Suite.java:26)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:63)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
at org.junit.runners.ParentRunner.run(ParentRunner.java:309)
at
org.eclipse.jdt.internal.junit4.runner.JUnit4TestReference.run(JUnit4TestReference.java:86)
at
org.eclipse.jdt.internal.junit.runner.TestExecution.run(TestExecution.java:38)
at
org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:459)
at
org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:678)
at
org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.run(RemoteTestRunner.java:382)
at
org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.main(RemoteTestRunner.java:192)
{code}
> Verify dependencies for Spark 2
> -------------------------------
>
> Key: SYSTEMML-1211
> URL: https://issues.apache.org/jira/browse/SYSTEMML-1211
> Project: SystemML
> Issue Type: Sub-task
> Components: Build
> Reporter: Deron Eriksson
> Assignee: Deron Eriksson
>
> With the migration to Spark 2, we should verify that the artifact assemblies
> are properly handling all dependencies.
> Also, we should verify that that artifact licenses properly include all
> dependencies following the Spark 2 migration.
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