If you use mutt you could limit your view to unread messages in the
current maildir with a simple command in the index view: l~N (an l, a tilde and 
an N without
spaces). On the other hand, after indexing all your mailboxes mu can
make a virtual mailbox with links to your unread messages, which you
can then open with mutt:
  $ mu index
  $ mu find --format=links --linksdir=~/Maildir/.virtual n
  $ mutt -f ~/Maildir/.virtual
Hope it helps.
Best regards,
Luis



On Mon, Jan 25, 2016 at 08:12:43PM +0100, famfop wrote:
> In the process of setting up mbsync I ran into (yet another^^) problem. 
> Is it possible to make sort of a symlink of an unread message to a 
> second folder with mbsync? My idea: I've got various mailboxes but want 
> to have the unread messages in one unified folder. I'm using mbsync in 
> combination with mutt but I'm confused whether its mutts or mbsyncs job.
> 
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                                                                  o
W. Luis Mochán,                      | tel:(52)(777)329-1734     /<(*)
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