/michael sorens/:
(1) Why am I seeing a difference between command-line and Eclipse compilation?
Check your Eclipse project configuration - you've most probably got the Xerces library set before the System library, which is really loaded at JVM boot, i.e. before Xerces, during run-time (incl. using the command line compiler).
(2) What is causing the compilation error at all?
I guess it is because Xerces 2.6.2 included experimental support for DOM 3 but using different package names (see 'org.apache.xerces.dom3' vs. 'org.w3c.dom') and the Xerces revision included in the Sun's Java 5 implementation is somewhat newer. You may try using Xerces 2.7.1 instead.
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