Hi David.
Thanks for the request - I'm a little busy preparing for the Jalview &
JABA workshop this week, but I'll communicate on the issue tracker
regarding these bugs.
With regard to genomic databases - we should start on this seriously in
2014 when we have our new developer in place. Until then, one useful
feature that is somewhat straightforward is to implement a Genbank
record parser and emitter. That would allow people to import data from a
wider number of databases. You could also take a look at the database
fetcher infrastructure under jalview.ws.dbfetcher - there are a series
of proxies that Jalview uses to retrieve sequence database records, and
we've had a request for an NCBI retrieval client here:
http://issues.jalview.org/browse/JAL-1375
I also started a new branch with some code from Cytoscape 3 that should
do the job - it just needs to be hooked up. Take a look at the
additional code in the branch called JAL-1375_ncbiclient and let me know
how you get on !
Jim
On 06/12/2013 17:23, David Roldán Martínez wrote:
Hi all,
I would like to increase my contributions but don't know where to
start from. As I'm expert on i18n issues, I've thought that it could
be a good idea to start reviewing once again i18n (JAL-1355
<http://issues.jalview.org/browse/JAL-1355>) and then work on JAL-998
<http://issues.jalview.org/browse/JAL-998>and JAL-1390
<http://issues.jalview.org/browse/JAL-1390> (for this one I would need
some help). I'm also interested at loading and querying genomic databases.
Just let me know who you think I can help.
Cheers,
David
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