As touched on in this morning's discussion:
I don't think the Jalview code formatter has any effect on this.
For example in Annotation Panel there are
line 291
if (!av.getColumnSelection().isVisible(index))
continue;
line 408
if (!viscols.isVisible(index))
continue;
which are not changed by the formatter.
This would need to be enforced in 'Java | Editor | Additional Save Actions':
[cid:186df7c6-9414-4d03-bfe5-81374a5fc62e]
I'll circulate a proposal for the options we should standardise on here.
Thanks,
Mungo
The University of Dundee is a registered Scottish Charity, No: SC015096
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