In addition to the above, if you are on a windows platform, you need to set autocrlf to true in your git config:
https://help.github.com/articles/dealing-with-line-endings/#global-settings-for-line-endings

Jim

On 08/10/2014 11:51, Mungo Carstairs wrote:

​​Another suggestion:


Jalview Project Configuration:


If we add a file to the root of the Jalview project named

.gitattributes

containing this line:

* text=auto


then that should ensure that all commits of text files are normalised to LF (not CRLF) line endings.


See

https://help.github.com/articles/dealing-with-line-endings/#per-repository-settings


NB I haven't actually committed or tried this yet because I am cautious about the note at https://help.github.com/articles/dealing-with-line-endings/#refreshing-a-repository-after-changing-line-endings



------------------------------------------------------------------------
*From:* [email protected] <[email protected]> on behalf of David Roldán Martínez <[email protected]>
*Sent:* 08 October 2014 10:52
*To:* Jalview Development List
*Subject:* Re: [Jalview-dev] Git diffs and newline characters
Good idea! I think this is important to make patching easier. Done in my installation!

Thanks, Mungo.

2014-10-08 10:21 GMT+02:00 Mungo Carstairs <[email protected] <mailto:[email protected]>>:

    ​​Would it be worth advising Eclipse users (e.g. us) to set this
    General | Workspace preference:


    ​ [pastedImage.png]


    instead of the default setting which may be Windows or Unix.


    I'm assuming here that files in Git are generally Unix formatted.


    I'll keep digging into Git configuration options to control the
    diffs as well, but this seem to be a bit...problematic....


    Mungo


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