Hi mungo. Can you raise issues for the tests that don't pass ... Priority urgent ?
Thanks. Jim. On 23 Mar 2015 06:23, "Mungo Carstairs (Staff)" <[email protected]> wrote: That should be the remaining sequenceFeatureRefactor changes merged to develop. A few unit tests not passing: * ?BioJsHtmlOutputTest - Tochukwu could you have a look? * DBRefFetcherTest - erratic responses from EMBL URL - ticket raised with them * RNAMLfileTest - missing input file examples/rna-alignment.xml * RNAStructExportImport.testRNAStructExport * failing with annotation display char = 'X' - not sure why * I did a visual comparison of examples/unfolded_RF00031.aln in Jalview 2.8.2 and develop and the annotations appear the same * ??TestAnnotate3D.testPDBfileVsRNAML * examples/2GIS.pdb has a last-base mismatch with the sequence returned by the RNAML service (which has a trailing 'a' - typo??) * ?CommandLineOperations.testHeadlessModeEPS - I am missing libquaqua64.dylib * Jws2ParamView, DisorderAnnotExportImport, JpredJabaStructExportImport * do these need a local jabaws, or JalviewJabawsTestUtils.serviceUrls changed from localhost to run? Mungo Mungo Carstairs Jalview Computational Scientist The Barton Group Division of Computational Biology College of Life Sciences University of Dundee, Dundee, Scotland, UK. www.jalview.org<http://www.jalview.org/> www.compbio.dundee.ac.uk<http://www.compbio.dundee.ac.uk/> The University of Dundee is a registered Scottish Charity, No: SC015096
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