Hi jalview developers,
we would like to use the Jalview-applet linked with an external  
Jmol-applet. In the example on the jalview web page the structure is  
highlighted when the mouse is moved over the according sequence and  
the coloring of the structure happens immediately. Unfortunately this  
does not work when loaded from my computer (not even with the same  
example page that comes with the source code). However, the function  
colourStructs() works fine. Do you have an idea how to fix this?
It would be also very useful to be able to colour the alignment by  
annotation with a javascript method and to link more than 10 pdb  
structures to sequences. Would it be possible to add this?
Thanks,
Nils Petersen
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