Hi Chris. On 05/12/2011 17:31, Chris Ulens wrote: > I would like to know if it is possible to change the BLOSUM62 color > from blue to shades of grey? It's not possible via Jalview's user interface, and unfortunately, the blosum62 colourscheme is currently implemented as a hard-wired set of colours. However, if you need grayscale for figure export, then I'd recommend post-processing your alignment figure in illustrator (or inkscape for EPS), or image magick (for PNG) - or even exporting as EPS and printing it to PDF using grayscale colour settings.
Alternately, I could give you some pointers if you would like to improve jalview by implementing this as a new feature! Jim. _______________________________________________ Jalview-discuss mailing list [email protected] http://www.compbio.dundee.ac.uk/mailman/listinfo/jalview-discuss
