Hi Jim, 

I'm trying to view the structure of some sequences, but when Jmol tries to open 
the associated .pdb files - it's not able to locate them. The same as reported 
in this message 

http://www.compbio.dundee.ac.uk/pipermail/jalview-discuss/2011-June/000614.html 

from what i've seen it seems that "\" used by Windows is misinterpreted and 
recognized as "delete the character that follows me" thus it is not able to 
locate where the .pdb file is stored. I attempted to move all the .pdb files 
directly to C: to make it easier to locate them. It works, but when i save the 
project and i reopen it, Jmol looks for a temporary file and it is not able to 
locate it [as the same "\" problem is kept], i' don't know i'm not an informatic

it happens in both Jalview 2.6, 2.7 and Development Branch [i downloaded the 
.jnlp from one of your previous messages] 

i'm using Windows XP 

best regards, 

fabio
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