Good afternoon Geoff
Our companies software is having issues with Jalview for the reason shown below.
do you have any suggestions how this can be resolved?

Thanks

PEter





Date: Tue, 22 Oct 2013 17:27:13 +0100
From: [email protected]
To: [email protected]; [email protected]; 
[email protected]
Subject: Re: [Jalview-discuss] question about the BLC format


  
    
  
  
    Yes, under Tools->Preferences  untick Open file at the bottom.

    

    Geoff.

    

    

    On 22/10/2013 17:21, Peter Felker
      wrote:

    
    
      
      
      Good afternoon 

          I was wondering if there is a simple way to avoid the Jalview
          from showing a bunch of illustrative ways to use the data
          every time it starts up. These have to be closed before going
          to the real work.

          

          Peter
        

        

        > Date: Tue, 22 Oct 2013 17:18:00 +0100

          > From: [email protected]

          > To: [email protected]

          > Subject: Re: [Jalview-discuss] question about the BLC
          format

          > 

          > Hi Hervé.

          > 

          > The best documentation source is here:

          >
          http://www.compbio.dundee.ac.uk/manuals/scanps/subsection3_15_2.html

          > 

          > Jalview supports access to any of the iterations - when
          reading a BLC 

          > file, you can put a '#<iteration number>' after the
          filename to select 

          > which iteration you want to import as an alignment. The
          BLC comment 

          > section is imported and shown from the Alignment
          properties dialog.

          > 

          > Is that sufficient ? Or should we encourage Geoff to put
          up a more 

          > detailed example ;)

          > 

          > Jim.

          > 

          > Quoting "Hervé Ménager" <[email protected]>:

          > 

          > > Hi Jim & al.,

          > > I'm looking for any kind of documentation regarding
          the BLC alignment

          > > format which is supported by Jalview (I'm looking to
          register this

          > > format in EDAM ontology). Is there somewhere a
          specification for this

          > > format?

          > > Best,

          > > Hervé

          > > _______________________________________________

          > > Jalview-discuss mailing list

          > > [email protected]

          > >
          http://www.compbio.dundee.ac.uk/mailman/listinfo/jalview-discuss

          > >

          > 

          > 

          > 

          >
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    -- 
Geoff Barton                             Professor of Bioinformatics
Head of Division of Computational Biology   College of Life Sciences
University of Dundee, Scotland, UK.          [email protected]
Tel:+44 1382 385860                         www.compbio.dundee.ac.uk 

The University of Dundee is registered Scottish charity: No.SC015096 

  


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